RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 SCN5AQ14524 2016 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 NRCAMQ92823 1304 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SLC27A2O14975 620 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 PRC1O43663 620 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SMIM10L2AP0DMW4 78 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SMIM10L2BP0DMW5 78 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 IBSPP21815 317 aaPredicted RBP12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 THPOP40225 353 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 ADKP55263 362 aaKnown RBP12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 MRPS9P82933 396 aaKnown RBP12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 PDCLQ13371 301 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 RIPK1Q13546 671 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 PLEKHG4Q58EX7 1191 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 CCDC181Q5TID7 509 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 MTHFD1LQ6UB35 978 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 NSMCE1Q8WV22 266 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 GPR20Q99678 358 aa12.4□□□□□ -0.42
TRAF3IP2-208ENST00000392556 SPDYE3A6NKU9 549 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 AKR1B15C9JRZ8 316 aaPredicted RBP12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 SH2B2O14492 632 aaPredicted RBP12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 JAK2O60674 1132 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 FAM107AO95990 144 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 PYGLP06737 847 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 FECHP22830 423 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 GRB10Q13322 594 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 SKIV2LQ15477 1246 aaKnown RBP12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 FAM26DQ5JW98 314 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 TAF2Q6P1X5 1199 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 C1orf131Q8NDD1 294 aaKnown RBP12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 HLA-CQ95604 372 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 PLEKHG4BQ96PX9 1271 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 COL4A6Q14031 1691 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 hCG_1984214I3L0E3 225 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 ATP6V1G2O95670 118 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 GHRP10912 638 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 BMP1P13497 986 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 HTRA4P83105 476 aaPredicted RBP12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 IFT88Q13099 833 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 BLMHQ13867 455 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 ACCSLQ4AC99 568 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 CCDC38Q502W7 563 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 RAD9BQ6WBX8 426 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 SYNE3Q6ZMZ3 975 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 TRAPPC11Q7Z392 1133 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 RSPH3Q86UC2 560 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 NLRP14Q86W24 1093 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 ZNF713Q8N859 430 aaPredicted RBP12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 B4GALNT2Q8NHY0 566 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 FAM81AQ8TBF8 368 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 MYCBPAPQ8TBZ2 947 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 SP7Q8TDD2 431 aaPredicted RBP12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 PPP1R13LQ8WUF5 828 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 CCT8L2Q96SF2 557 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 GLT8D2Q9H1C3 349 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 PSTPIP2Q9H939 334 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 SENP2Q9HC62 589 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 BLOC1S6Q9UL45 172 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 SLC12A7Q9Y666 1083 aa12.39□□□□□ -0.43
TRAF3IP2-208ENST00000392556 A0A1B0GVL5 298 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 MEIS2O14770 477 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 ZSCAN9O15535 394 aaPredicted RBP12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 PPP1R37O75864 691 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 DEFB103AP81534 67 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 CKAP4Q07065 602 aaKnown RBP12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 MTF1Q14872 753 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 ANKRD20A8PQ5CZ79 823 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 ARHGAP22Q7Z5H3 698 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 SGMS1Q86VZ5 419 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 NUP58Q9BVL2 599 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 C1QTNF1Q9BXJ1 281 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 RNPEPQ9H4A4 650 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 NOD2Q9HC29 1040 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 HAUS2Q9NVX0 235 aa12.38□□□□□ -0.43
TRAF3IP2-208ENST00000392556 LINC01553A4QN01 128 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 SOWAHDA6NJG2 315 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 APBA1Q02410 837 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 MBTPS1Q14703 1052 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 PTPROQ16827 1216 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 TTMPQ5BVD1 217 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 PPP1R18Q6NYC8 613 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 DBF4BQ8NFT6 615 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 KCNG4Q8TDN1 519 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 PAPOLBQ9NRJ5 636 aaKnown RBP12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 BUB1BO60566 1050 aaPredicted RBP12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 LPXNO60711 386 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 YEATS4O95619 227 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 FOSP01100 380 aaPredicted RBP12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 LINGO3P0C6S8 592 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 PYGBP11216 843 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 RCAN1P53805 252 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 ADAM17P78536 824 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 ZNF200P98182 395 aaPredicted RBP12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 GALNT15Q8N3T1 639 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 SEPT1Q8WYJ6 367 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 WNT8BQ93098 351 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 CCDC51Q96ER9 411 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 CERS4Q9HA82 394 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 ERAP1Q9NZ08 941 aa12.37□□□□□ -0.43
TRAF3IP2-208ENST00000392556 RWDD3Q9Y3V2 267 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms