RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 DEFB103AP81534 67 aa27.86■■■□□ 2.05
HOMER3-202ENST00000392351 RASIP1Q5U651 963 aa27.86■■■□□ 2.05
HOMER3-202ENST00000392351 PRPF38BQ5VTL8 546 aaKnown RBP27.86■■■□□ 2.05
HOMER3-202ENST00000392351 EPM2AIP1Q7L775 607 aaPredicted RBP27.86■■■□□ 2.05
HOMER3-202ENST00000392351 MYOCDQ8IZQ8 938 aa27.86■■■□□ 2.05
HOMER3-202ENST00000392351 PRO3102Q9H379 93 aa27.86■■■□□ 2.05
HOMER3-202ENST00000392351 SLC4A7Q9Y6M7 1214 aa27.86■■■□□ 2.05
HOMER3-202ENST00000392351 C9IYK1 514 aa27.85■■■□□ 2.05
HOMER3-202ENST00000392351 N4BP3O15049 544 aa27.85■■■□□ 2.05
HOMER3-202ENST00000392351 AMHP03971 560 aa27.85■■■□□ 2.05
HOMER3-202ENST00000392351 PTMSP20962 102 aa27.85■■■□□ 2.05
HOMER3-202ENST00000392351 SARSP49591 514 aaKnown RBP27.85■■■□□ 2.05
HOMER3-202ENST00000392351 SLC27A1Q6PCB7 646 aa27.85■■■□□ 2.05
HOMER3-202ENST00000392351 ACCSQ96QU6 501 aa27.85■■■□□ 2.05
HOMER3-202ENST00000392351 LIG4P49917 911 aa27.84■■■□□ 2.05
HOMER3-202ENST00000392351 UBXN11Q5T124 520 aa27.84■■■□□ 2.05
HOMER3-202ENST00000392351 EEF1DP3Q658K8 133 aa27.84■■■□□ 2.05
HOMER3-202ENST00000392351 ZPBP2Q6X784 338 aa27.84■■■□□ 2.05
HOMER3-202ENST00000392351 TDHQ8IZJ6 230 aa27.84■■■□□ 2.05
HOMER3-202ENST00000392351 SCFD1Q8WVM8 642 aa27.84■■■□□ 2.05
HOMER3-202ENST00000392351 TRAIPQ9BWF2 469 aa27.84■■■□□ 2.05
HOMER3-202ENST00000392351 EIF2AQ9BY44 585 aaKnown RBP27.84■■■□□ 2.05
HOMER3-202ENST00000392351 FAM105AQ9NUU6 356 aa27.84■■■□□ 2.05
HOMER3-202ENST00000392351 EXOC7Q9UPT5 735 aa27.84■■■□□ 2.05
HOMER3-202ENST00000392351 TNFSF13BQ9Y275 285 aa27.84■■■□□ 2.05
HOMER3-202ENST00000392351 GDAQ9Y2T3 454 aa27.84■■■□□ 2.05
HOMER3-202ENST00000392351 ADPGKQ9BRR6 497 aa27.83■■■□□ 2.05
HOMER3-202ENST00000392351 TRIM6Q9C030 488 aaPredicted RBP27.83■■■□□ 2.05
HOMER3-202ENST00000392351 IKZF4Q9H2S9 585 aa27.83■■■□□ 2.05
HOMER3-202ENST00000392351 KIAA1468Q9P260 1216 aa27.83■■■□□ 2.05
HOMER3-202ENST00000392351 ANKFY1Q9P2R3 1169 aa27.83■■■□□ 2.05
HOMER3-202ENST00000392351 UBE4BO95155 1302 aa27.83■■■□□ 2.04
HOMER3-202ENST00000392351 A0A0U1RQF3 1178 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 NPTXRO95502 500 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 PIGRP01833 764 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 RAB27AP51159 221 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 SYCP3Q8IZU3 236 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 ZNF507Q8TCN5 953 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 TCHPQ9BT92 498 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 MAN1B1Q9UKM7 699 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 TOM1L1O75674 476 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 ZNF568Q3ZCX4 644 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 ISM2Q6H9L7 571 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 TMCO2Q7Z6W1 182 aaPredicted RBP27.82■■■□□ 2.04
HOMER3-202ENST00000392351 ECHDC2Q86YB7 292 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 NELFCDQ8IXH7 590 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 ZBTB45Q96K62 511 aaPredicted RBP27.82■■■□□ 2.04
HOMER3-202ENST00000392351 SLC9A7Q96T83 725 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 TMEM206Q9H813 350 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 PTPRHQ9HD43 1115 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 PCDHB2Q9Y5E7 798 aa27.82■■■□□ 2.04
HOMER3-202ENST00000392351 LAMA3Q16787 3333 aa27.81■■■□□ 2.04
HOMER3-202ENST00000392351 GBF1Q92538 1859 aa27.81■■■□□ 2.04
HOMER3-202ENST00000392351 BIN1O00499 593 aa27.81■■■□□ 2.04
HOMER3-202ENST00000392351 UPP2O95045 317 aa27.81■■■□□ 2.04
HOMER3-202ENST00000392351 ATP2A2P16615 1042 aaKnown RBP27.81■■■□□ 2.04
HOMER3-202ENST00000392351 PROZP22891 400 aa27.81■■■□□ 2.04
HOMER3-202ENST00000392351 HOXD13P35453 343 aa27.81■■■□□ 2.04
HOMER3-202ENST00000392351 MPZL3Q6UWV2 235 aa27.81■■■□□ 2.04
HOMER3-202ENST00000392351 ZBTB33Q86T24 672 aa27.81■■■□□ 2.04
HOMER3-202ENST00000392351 SMYD4Q8IYR2 804 aaPredicted RBP27.81■■■□□ 2.04
HOMER3-202ENST00000392351 ZMYM2Q9UBW7 1377 aa27.8■■■□□ 2.04
HOMER3-202ENST00000392351 SKIP12755 728 aa27.8■■■□□ 2.04
HOMER3-202ENST00000392351 MATR3P43243 847 aaKnown RBP eCLIP27.8■■■□□ 2.04
HOMER3-202ENST00000392351 FAM189BP81408 668 aa27.8■■■□□ 2.04
HOMER3-202ENST00000392351 BMT2Q1RMZ1 405 aa27.8■■■□□ 2.04
HOMER3-202ENST00000392351 ZNF658Q5TYW1 1059 aaPredicted RBP27.8■■■□□ 2.04
HOMER3-202ENST00000392351 SLC39A4Q6P5W5 647 aa27.8■■■□□ 2.04
HOMER3-202ENST00000392351 RNF169Q8NCN4 708 aa27.8■■■□□ 2.04
HOMER3-202ENST00000392351 TOP1MTQ969P6 601 aa27.8■■■□□ 2.04
HOMER3-202ENST00000392351 LRFN2Q9ULH4 789 aa27.8■■■□□ 2.04
HOMER3-202ENST00000392351 MAPK8IP1Q9UQF2 711 aa27.8■■■□□ 2.04
HOMER3-202ENST00000392351 COLQQ9Y215 455 aaPredicted RBP27.8■■■□□ 2.04
HOMER3-202ENST00000392351 TRIOBPQ9H2D6 2365 aa27.79■■■□□ 2.04
HOMER3-202ENST00000392351 TISP43B9A030 160 aa27.79■■■□□ 2.04
HOMER3-202ENST00000392351 ANKRD63C9JTQ0 380 aa27.79■■■□□ 2.04
HOMER3-202ENST00000392351 ABLIM1O14639 778 aa27.79■■■□□ 2.04
HOMER3-202ENST00000392351 CLDN3O15551 220 aa27.79■■■□□ 2.04
HOMER3-202ENST00000392351 DCAF4L1Q3SXM0 396 aa27.79■■■□□ 2.04
HOMER3-202ENST00000392351 FAM117BQ6P1L5 589 aa27.79■■■□□ 2.04
HOMER3-202ENST00000392351 APBB1IPQ7Z5R6 666 aaPredicted RBP27.79■■■□□ 2.04
HOMER3-202ENST00000392351 NPAS4Q8IUM7 802 aa27.79■■■□□ 2.04
HOMER3-202ENST00000392351 CDT1Q9H211 546 aa27.79■■■□□ 2.04
HOMER3-202ENST00000392351 TMEM161AQ9NX61 479 aa27.79■■■□□ 2.04
HOMER3-202ENST00000392351 IPPQ9Y573 584 aa27.79■■■□□ 2.04
HOMER3-202ENST00000392351 PCDHB7Q9Y5E2 793 aa27.79■■■□□ 2.04
HOMER3-202ENST00000392351 ZNF623O75123 536 aa27.78■■■□□ 2.04
HOMER3-202ENST00000392351 STAG3L1P0CL83 205 aa27.78■■■□□ 2.04
HOMER3-202ENST00000392351 HARSP12081 509 aaKnown RBP27.78■■■□□ 2.04
HOMER3-202ENST00000392351 ATF7P17544 494 aaPredicted RBP27.78■■■□□ 2.04
HOMER3-202ENST00000392351 NOLC1Q14978 699 aaKnown RBP eCLIP27.78■■■□□ 2.04
HOMER3-202ENST00000392351 CRIPAKQ8N1N5 446 aa27.78■■■□□ 2.04
HOMER3-202ENST00000392351 SMG8Q8ND04 991 aaKnown RBP27.78■■■□□ 2.04
HOMER3-202ENST00000392351 PHOSPHO2Q8TCD6 241 aa27.78■■■□□ 2.04
HOMER3-202ENST00000392351 NXF3Q9H4D5 531 aaKnown RBP27.78■■■□□ 2.04
HOMER3-202ENST00000392351 ELAC1Q9H777 363 aaKnown RBP27.78■■■□□ 2.04
HOMER3-202ENST00000392351 RNF216Q9NWF9 866 aaPredicted RBP27.78■■■□□ 2.04
HOMER3-202ENST00000392351 HES2Q9Y543 173 aa27.78■■■□□ 2.04
HOMER3-202ENST00000392351 KNOP1Q1ED39 458 aaKnown RBP27.77■■■□□ 2.04
HOMER3-202ENST00000392351 KLHL40Q2TBA0 621 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms