RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 OTUD6AQ7L8S5 288 aa21.57■■□□□ 1.04
CSNK1D-203ENST00000392334 ZNF720Q7Z2F6 126 aa21.57■■□□□ 1.04
CSNK1D-203ENST00000392334 IFT20Q8IY31 132 aa21.57■■□□□ 1.04
CSNK1D-203ENST00000392334 CAPS2Q9BXY5 557 aa21.57■■□□□ 1.04
CSNK1D-203ENST00000392334 RBM12Q9NTZ6 932 aaKnown RBP21.57■■□□□ 1.04
CSNK1D-203ENST00000392334 ANKEF1Q9NU02 776 aa21.57■■□□□ 1.04
CSNK1D-203ENST00000392334 CLIC2O15247 247 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 HSF2BPO75031 334 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 CPP00450 1065 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 TXNP10599 105 aaKnown RBP21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 TGFB3P10600 412 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 CXCR5P32302 372 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 MAP2K2P36507 400 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 SLC7A5Q01650 507 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 TDRD12Q587J7 1177 aaKnown RBP21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 EFCAB13Q8IY85 973 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 TSEN2Q8NCE0 465 aaKnown RBP21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 NPLOC4Q8TAT6 608 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 PPM1EQ8WY54 764 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 ASB14A6NK59 587 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 ATG7O95352 703 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 TCF7P36402 384 aaPredicted RBP21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 ADAM9Q13443 819 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 MTERF2Q49AM1 385 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 CCDC40Q4G0X9 1142 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 METTL7BQ6UX53 244 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 TRIM59Q8IWR1 403 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 MREGQ8N565 214 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 PCYT2Q99447 389 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 PCDHGC5Q9Y5F6 944 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 MGAMO43451 1857 aa21.56■■□□□ 1.04
CSNK1D-203ENST00000392334 EIF3HO15372 352 aaKnown RBP eCLIP21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 MATR3P43243 847 aaKnown RBP eCLIP21.55■■□□□ 1.041e-6■■□□□ 13.8
CSNK1D-203ENST00000392334 CAP1Q01518 475 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 MORN1Q5T089 497 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 RNF186Q9NXI6 227 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 SMARCAL1Q9NZC9 954 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 EHD2Q9NZN4 543 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 GRIN2DO15399 1336 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 SLC15A5A6NIM6 579 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 BTNL10A8MVZ5 291 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 K7ENM7 598 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 BUB1O43683 1085 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 NR2F2P24468 414 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 PEX3P56589 373 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 SLC18A3Q16572 532 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 TRIM50Q86XT4 487 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 DHX37Q8IY37 1157 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 REM2Q8IYK8 340 aaPredicted RBP21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 MAML3Q96JK9 1138 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 RUFY1Q96T51 708 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 LSM14BQ9BX40 385 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 CYP26B1Q9NR63 512 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 AIPL1Q9NZN9 384 aa21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 MAFBQ9Y5Q3 323 aaPredicted RBP21.55■■□□□ 1.04
CSNK1D-203ENST00000392334 CES2O00748 559 aa21.54■■□□□ 1.04
CSNK1D-203ENST00000392334 TNPO2O14787 897 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-203ENST00000392334 MARK3P27448 753 aa21.54■■□□□ 1.04
CSNK1D-203ENST00000392334 PAK2Q13177 524 aa21.54■■□□□ 1.04
CSNK1D-203ENST00000392334 CELF3Q5SZQ8 465 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-203ENST00000392334 MEI1Q5TIA1 1274 aa21.54■■□□□ 1.04
CSNK1D-203ENST00000392334 MORC4Q8TE76 937 aa21.54■■□□□ 1.04
CSNK1D-203ENST00000392334 SPATA33Q96N06 139 aa21.54■■□□□ 1.04
CSNK1D-203ENST00000392334 PSMB7Q99436 277 aa21.54■■□□□ 1.04
CSNK1D-203ENST00000392334 LARSQ9P2J5 1176 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-203ENST00000392334 SEL1LQ9UBV2 794 aa21.54■■□□□ 1.04
CSNK1D-203ENST00000392334 IGSF9BQ9UPX0 1349 aa21.54■■□□□ 1.04
CSNK1D-203ENST00000392334 NOP56O00567 594 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 DKC1O60832 514 aaKnown RBP eCLIP21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 PLS3P13797 630 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 TTMPQ5BVD1 217 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 EMC10Q5UCC4 262 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 CCDC62Q6P9F0 684 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 CD302Q8IX05 232 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 C1orf131Q8NDD1 294 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 SEPT1Q8WYJ6 367 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 KIFC3Q9BVG8 833 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 NLRC4Q9NPP4 1024 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 A0A087WUV0 522 aaPredicted RBP21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 TGFB1I1O43294 461 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 PALMO75781 387 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 PSMC4P43686 418 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 STAT5BP51692 787 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 LACTBP83111 547 aaPredicted RBP21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 MAP2K5Q13163 448 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 XKR3Q5GH77 459 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 PPP4R3CPQ6ZMV5 832 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 IQCKQ8N0W5 287 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 PLEKHA4Q9H4M7 779 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 GJD2Q9UKL4 321 aa21.53■■□□□ 1.04
CSNK1D-203ENST00000392334 CCDC169A6NNP5 214 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 SLC16A4O15374 487 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 OATP04181 439 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 CYP2B6P20813 491 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 TTLL4Q14679 1199 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 BMT2Q1RMZ1 405 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.52■■□□□ 1.041e-8■■■■■ 49.8
CSNK1D-203ENST00000392334 GLG1Q92896 1179 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 ZIM3Q96PE6 472 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 GPR20Q99678 358 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms