RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 BPIFB4P59827 614 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 IRF9Q00978 393 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 ELAVL1Q15717 326 aaKnown RBP2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 SEPT7Q16181 437 aaKnown RBP2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 CCDC142Q17RM4 750 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 GAGE13Q4V321 117 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 IL31Q6EBC2 164 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 CYB5RLQ6IPT4 315 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 DPY19L2P1Q6NXN4 242 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 KSR2Q6VAB6 950 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 GPRIN1Q7Z2K8 1008 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 SYT12Q8IV01 421 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 LYSMD2Q8IV50 215 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 MYO1HQ8N1T3 1032 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 ANKRD35Q8N283 1001 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 PLA2G15Q8NCC3 412 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 BEND2Q8NDZ0 799 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 PIK3C3Q8NEB9 887 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 SVIPQ8NHG7 77 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 COG1Q8WTW3 980 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 CHAC2Q8WUX2 184 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 HOOK2Q96ED9 719 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 MFSD3Q96ES6 412 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 MAML3Q96JK9 1138 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 ZNF512Q96ME7 567 aaPredicted RBP2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 SMAD5Q99717 465 aaKnown RBP2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 CDH19Q9H159 772 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 NRDE2Q9H7Z3 1164 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 CAAP1Q9H8G2 361 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 NDOR1Q9UHB4 597 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 NRBP1Q9UHY1 535 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 FZD1Q9UP38 647 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 COMMD10Q9Y6G5 202 aa2.8□□□□□ -1.96
SNORA40.19-201ENST00000390846 A0A0A6YYJ9 748 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 INO80B-WBP1J3KQ70 363 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 FZD9O00144 591 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 ELL2O00472 640 aaPredicted RBP2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 LPXNO60711 386 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 CAND2O75155 1236 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 SRGNP10124 158 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 NEK3P51956 506 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 SLC6A3Q01959 620 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 FAM214AQ32MH5 1076 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 LONRF3Q496Y0 759 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 FAM47CQ5HY64 1035 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 TPH2Q8IWU9 490 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 CHPFQ8IZ52 775 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 SPICE1Q8N0Z3 855 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 SAMD3Q8N6K7 520 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 HIPK4Q8NE63 616 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 SLC25A43Q8WUT9 341 aaPredicted RBP2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 LPPQ93052 612 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 CRAMP1Q96RY5 1269 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 CDC6Q99741 560 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 FDXACB1Q9BRP7 624 aaPredicted RBP2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 TEX101Q9BY14 249 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 GPR87Q9BY21 358 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 RHOBTB2Q9BYZ6 727 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 INO80BQ9C086 356 aaPredicted RBP2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 TMX1Q9H3N1 280 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 R3HDMLQ9H3Y0 253 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 PPCSQ9HAB8 311 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 MAP3K20Q9NYL2 800 aaKnown RBP2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 DDX20Q9UHI6 824 aaKnown RBP2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 TMPRSS11EQ9UL52 423 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 FAM184BQ9ULE4 1060 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 PLAAQ9Y263 795 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 R3HCC1Q9Y3T6 440 aaKnown RBP2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 CHST2Q9Y4C5 530 aa2.79□□□□□ -1.96
SNORA40.19-201ENST00000390846 CFAP69A5D8W1 941 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 TMEM200CA6NKL6 621 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 APAF1O14727 1248 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 GSTA4O15217 222 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 CYP27B1O15528 508 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 PIP5K1CO60331 668 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 RFPL3O75679 317 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 ABLIM3O94929 683 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 F2P00734 622 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 FAM163BP0C2L3 166 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 KIR2DL3P43628 341 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 SCAPQ12770 1279 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 FSTL1Q12841 308 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 SIM2Q14190 667 aaPredicted RBP2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 ZNF460Q14592 562 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 MLC1Q15049 377 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 INO80DQ53TQ3 878 aaPredicted RBP2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 FAM83BQ5T0W9 1011 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 FKBP15Q5T1M5 1219 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 CNNM4Q6P4Q7 775 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 OLFML1Q6UWY5 402 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 Q6YL49 198 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 BMP8AQ7Z5Y6 402 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 LRRTM3Q86VH5 581 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 GLCCI1Q86VQ1 547 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 SLC41A1Q8IVJ1 513 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 TCEAL8Q8IYN2 117 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 CBARPQ8N350 705 aaPredicted RBP2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 ZNF276Q8N554 614 aa2.78□□□□□ -1.96
SNORA40.19-201ENST00000390846 OR52N2Q8NGI0 321 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms