RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 TSPAN1O60635 241 aa29.38■■■□□ 2.29
NPHP3-202ENST00000383282 EIF5BO60841 1220 aaKnown RBP29.38■■■□□ 2.29
NPHP3-202ENST00000383282 SSBP05455 408 aaKnown RBP eCLIP29.38■■■□□ 2.29
NPHP3-202ENST00000383282 AFF1P51825 1210 aaKnown RBP29.38■■■□□ 2.29
NPHP3-202ENST00000383282 DIS3L2Q8IYB7 885 aaKnown RBP29.38■■■□□ 2.29
NPHP3-202ENST00000383282 PLCD3Q8N3E9 789 aa29.38■■■□□ 2.29
NPHP3-202ENST00000383282 NSUN7Q8NE18 718 aaKnown RBP29.38■■■□□ 2.29
NPHP3-202ENST00000383282 SSX2IPQ9Y2D8 614 aa29.38■■■□□ 2.29
NPHP3-202ENST00000383282 BTBD18B2RXH4 712 aa29.37■■■□□ 2.29
NPHP3-202ENST00000383282 LARGE1O95461 756 aa29.37■■■□□ 2.29
NPHP3-202ENST00000383282 TXKP42681 527 aa29.37■■■□□ 2.29
NPHP3-202ENST00000383282 IFNLR1Q8IU57 520 aaPredicted RBP29.37■■■□□ 2.29
NPHP3-202ENST00000383282 HACE1Q8IYU2 909 aa29.37■■■□□ 2.29
NPHP3-202ENST00000383282 SMG8Q8ND04 991 aaKnown RBP29.37■■■□□ 2.29
NPHP3-202ENST00000383282 KLHL5Q96PQ7 755 aa29.37■■■□□ 2.29
NPHP3-202ENST00000383282 TRIM6Q9C030 488 aaPredicted RBP29.37■■■□□ 2.29
NPHP3-202ENST00000383282 CSRNP2Q9H175 543 aa29.37■■■□□ 2.29
NPHP3-202ENST00000383282 USTQ9Y2C2 406 aa29.37■■■□□ 2.29
NPHP3-202ENST00000383282 URODP06132 367 aa29.36■■■□□ 2.29
NPHP3-202ENST00000383282 OR1G1P47890 313 aa29.36■■■□□ 2.29
NPHP3-202ENST00000383282 TMC5Q6UXY8 1006 aa29.36■■■□□ 2.29
NPHP3-202ENST00000383282 ZDHHC14Q8IZN3 488 aa29.36■■■□□ 2.29
NPHP3-202ENST00000383282 CPB2Q96IY4 423 aa29.36■■■□□ 2.29
NPHP3-202ENST00000383282 EIF2AQ9BY44 585 aaKnown RBP29.36■■■□□ 2.29
NPHP3-202ENST00000383282 PRG3Q9Y2Y8 225 aaPredicted RBP29.36■■■□□ 2.29
NPHP3-202ENST00000383282 NR1I2O75469 434 aa29.35■■■□□ 2.29
NPHP3-202ENST00000383282 SOD2P04179 222 aa29.35■■■□□ 2.29
NPHP3-202ENST00000383282 CNPP09543 421 aaKnown RBP29.35■■■□□ 2.29
NPHP3-202ENST00000383282 RARRES1P49788 294 aa29.35■■■□□ 2.29
NPHP3-202ENST00000383282 CLCN4P51793 760 aa29.35■■■□□ 2.29
NPHP3-202ENST00000383282 FOSBP53539 338 aa29.35■■■□□ 2.29
NPHP3-202ENST00000383282 CAPSQ13938 189 aa29.35■■■□□ 2.29
NPHP3-202ENST00000383282 KANK3Q6NY19 840 aa29.35■■■□□ 2.29
NPHP3-202ENST00000383282 ASAP3Q8TDY4 903 aa29.35■■■□□ 2.29
NPHP3-202ENST00000383282 GAD1Q99259 594 aa29.35■■■□□ 2.29
NPHP3-202ENST00000383282 ARL5CA6NH57 179 aa29.34■■■□□ 2.29
NPHP3-202ENST00000383282 AVPR2P30518 371 aa29.34■■■□□ 2.29
NPHP3-202ENST00000383282 ARL2P36404 184 aa29.34■■■□□ 2.29
NPHP3-202ENST00000383282 MLH1P40692 756 aa29.34■■■□□ 2.29
NPHP3-202ENST00000383282 NEK4P51957 841 aa29.34■■■□□ 2.29
NPHP3-202ENST00000383282 COLGALT2Q8IYK4 626 aa29.34■■■□□ 2.29
NPHP3-202ENST00000383282 HERC2P3Q9BVR0 1158 aa29.34■■■□□ 2.29
NPHP3-202ENST00000383282 NFKBIZQ9BYH8 718 aa29.34■■■□□ 2.29
NPHP3-202ENST00000383282 INPPL1O15357 1258 aa29.33■■■□□ 2.29
NPHP3-202ENST00000383282 JAK2O60674 1132 aa29.33■■■□□ 2.29
NPHP3-202ENST00000383282 VCPP55072 806 aaKnown RBP29.33■■■□□ 2.29
NPHP3-202ENST00000383282 MBTD1Q05BQ5 628 aa29.33■■■□□ 2.29
NPHP3-202ENST00000383282 ELMSAN1Q6PJG2 1045 aa29.33■■■□□ 2.29
NPHP3-202ENST00000383282 CCDC149Q6ZUS6 474 aa29.33■■■□□ 2.29
NPHP3-202ENST00000383282 GPR149Q86SP6 731 aa29.33■■■□□ 2.29
NPHP3-202ENST00000383282 ACSF2Q96CM8 615 aaPredicted RBP29.33■■■□□ 2.29
NPHP3-202ENST00000383282 APOL6Q9BWW8 343 aa29.33■■■□□ 2.29
NPHP3-202ENST00000383282 RNF39Q9H2S5 420 aa29.33■■■□□ 2.29
NPHP3-202ENST00000383282 GIT1Q9Y2X7 761 aa29.33■■■□□ 2.29
NPHP3-202ENST00000383282 HES2Q9Y543 173 aa29.33■■■□□ 2.29
NPHP3-202ENST00000383282 C2CD2LO14523 706 aa29.32■■■□□ 2.28
NPHP3-202ENST00000383282 LILRB3O75022 631 aa29.32■■■□□ 2.28
NPHP3-202ENST00000383282 BRD1O95696 1058 aa29.32■■■□□ 2.28
NPHP3-202ENST00000383282 XRCC6P12956 609 aaKnown RBP eCLIP29.32■■■□□ 2.28
NPHP3-202ENST00000383282 GLRA2P23416 452 aa29.32■■■□□ 2.28
NPHP3-202ENST00000383282 SCNN1GP51170 649 aa29.32■■■□□ 2.28
NPHP3-202ENST00000383282 PIGOQ8TEQ8 1089 aa29.32■■■□□ 2.28
NPHP3-202ENST00000383282 MTMR9Q96QG7 549 aa29.32■■■□□ 2.28
NPHP3-202ENST00000383282 MARCH5Q9NX47 278 aa29.32■■■□□ 2.28
NPHP3-202ENST00000383282 LIMD1Q9UGP4 676 aa29.32■■■□□ 2.28
NPHP3-202ENST00000383282 DPP7Q9UHL4 492 aa29.32■■■□□ 2.28
NPHP3-202ENST00000383282 ARID2Q68CP9 1835 aa29.31■■■□□ 2.28
NPHP3-202ENST00000383282 ZDBF2Q9HCK1 2354 aa29.31■■■□□ 2.28
NPHP3-202ENST00000383282 USO1O60763 962 aaKnown RBP29.31■■■□□ 2.28
NPHP3-202ENST00000383282 ADH1AP07327 375 aa29.31■■■□□ 2.28
NPHP3-202ENST00000383282 ARF4P18085 180 aaPredicted RBP29.31■■■□□ 2.28
NPHP3-202ENST00000383282 SAFBQ15424 915 aaKnown RBP eCLIP29.31■■■□□ 2.28
NPHP3-202ENST00000383282 AMHR2Q16671 573 aa29.31■■■□□ 2.28
NPHP3-202ENST00000383282 RPS6KC1Q96S38 1066 aa29.31■■■□□ 2.28
NPHP3-202ENST00000383282 IRF2BPLQ9H1B7 796 aa29.31■■■□□ 2.28
NPHP3-202ENST00000383282 POLR3FQ9H1D9 316 aaPredicted RBP29.31■■■□□ 2.28
NPHP3-202ENST00000383282 POTEMA6NI47 508 aa29.3■■■□□ 2.28
NPHP3-202ENST00000383282 ASGR2P07307 311 aa29.3■■■□□ 2.28
NPHP3-202ENST00000383282 GLUD2P49448 558 aa29.3■■■□□ 2.28
NPHP3-202ENST00000383282 DSC1Q08554 894 aa29.3■■■□□ 2.28
NPHP3-202ENST00000383282 TCF15Q12870 199 aa29.3■■■□□ 2.28
NPHP3-202ENST00000383282 SLC27A1Q6PCB7 646 aa29.3■■■□□ 2.28
NPHP3-202ENST00000383282 C15orf39Q6ZRI6 1047 aa29.3■■■□□ 2.28
NPHP3-202ENST00000383282 OTOP3Q7RTS5 596 aa29.3■■■□□ 2.28
NPHP3-202ENST00000383282 ZFP42Q96MM3 310 aa29.3■■■□□ 2.28
NPHP3-202ENST00000383282 COLEC11Q9BWP8 271 aa29.3■■■□□ 2.28
NPHP3-202ENST00000383282 NXF3Q9H4D5 531 aaKnown RBP29.3■■■□□ 2.28
NPHP3-202ENST00000383282 WNT7AO00755 349 aa29.29■■■□□ 2.28
NPHP3-202ENST00000383282 PDGFBP01127 241 aaPredicted RBP29.29■■■□□ 2.28
NPHP3-202ENST00000383282 ATP2B1P20020 1258 aa29.29■■■□□ 2.28
NPHP3-202ENST00000383282 NUBP1P53384 320 aa29.29■■■□□ 2.28
NPHP3-202ENST00000383282 MIOSQ9NXC5 875 aa29.29■■■□□ 2.28
NPHP3-202ENST00000383282 LRRIQ4A6NIV6 560 aa29.28■■■□□ 2.28
NPHP3-202ENST00000383282 MCM7P33993 719 aa29.28■■■□□ 2.28
NPHP3-202ENST00000383282 MCPH1Q8NEM0 835 aa29.28■■■□□ 2.28
NPHP3-202ENST00000383282 TUFT1Q9NNX1 390 aa29.28■■■□□ 2.28
NPHP3-202ENST00000383282 MAN1C1Q9NR34 630 aa29.28■■■□□ 2.28
NPHP3-202ENST00000383282 B4GALT5O43286 388 aa29.27■■■□□ 2.28
NPHP3-202ENST00000383282 NPTXRO95502 500 aa29.27■■■□□ 2.28
NPHP3-202ENST00000383282 GLUD1P00367 558 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms