RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SCLT1Q96NL6 688 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 FAM129AQ9BZQ8 928 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 KCTD10Q9H3F6 313 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 AGO4Q9HCK5 861 aaKnown RBP9.65□□□□□ -0.86
GPNMB-202ENST00000381990 PXMP2Q9NR77 195 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 ZNF214Q9UL59 606 aaPredicted RBP9.65□□□□□ -0.86
GPNMB-202ENST00000381990 DIS3Q9Y2L1 958 aaKnown RBP9.65□□□□□ -0.86
GPNMB-202ENST00000381990 MYPNQ86TC9 1320 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 CFAP73A6NFT4 308 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 F8VZ95 297 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 DHX15O43143 795 aaKnown RBP9.65□□□□□ -0.86
GPNMB-202ENST00000381990 PPFIA2O75334 1257 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 NUDT17P0C025 328 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 EIF2AK2P19525 551 aaKnown RBP9.65□□□□□ -0.86
GPNMB-202ENST00000381990 RNASE9P60153 205 aaKnown RBP9.65□□□□□ -0.86
GPNMB-202ENST00000381990 MTMR1Q13613 665 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 EDRF1Q3B7T1 1238 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 SH3D19Q5HYK7 790 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 SNRNP48Q6IEG0 339 aaKnown RBP9.65□□□□□ -0.86
GPNMB-202ENST00000381990 EPM2AIP1Q7L775 607 aaPredicted RBP9.65□□□□□ -0.86
GPNMB-202ENST00000381990 NELFCDQ8IXH7 590 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 OR2W6PQ8NHA6 318 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 PDCD2LQ9BRP1 358 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 GANQ9H2C0 597 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 KCND2Q9NZV8 630 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 RIPK3Q9Y572 518 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 CCT8L1PA6NM43 557 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 ZBTB48P10074 688 aaPredicted RBP9.64□□□□□ -0.87
GPNMB-202ENST00000381990 PRKCIP41743 596 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 PRKG1Q13976 671 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 C1orf186Q6ZWK4 172 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 MIER3Q7Z3K6 550 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 PEX26Q7Z412 305 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 SULF1Q8IWU6 871 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 PGM2Q96G03 612 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 RSRC1Q96IZ7 334 aaKnown RBP9.64□□□□□ -0.87
GPNMB-202ENST00000381990 XPO6Q96QU8 1125 aaKnown RBP9.64□□□□□ -0.87
GPNMB-202ENST00000381990 NAP1L3Q99457 506 aaPredicted RBP9.64□□□□□ -0.87
GPNMB-202ENST00000381990 LXNQ9BS40 222 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 TEX13BQ9BXU2 312 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 PACSIN1Q9BY11 444 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 MAF1Q9H063 256 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 BATF3Q9NR55 127 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 OLFML3Q9NRN5 406 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 TBC1D22BQ9NU19 505 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 HOXC10Q9NYD6 342 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 CNOT8Q9UFF9 292 aaKnown RBP9.64□□□□□ -0.87
GPNMB-202ENST00000381990 NAGPAQ9UK23 515 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 SLC12A4Q9UP95 1085 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 RSPH10B2B2RC85 870 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 FAM13AO94988 1023 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 RSPH10BP0C881 870 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 PTK2Q05397 1052 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 DHX9Q08211 1270 aaKnown RBP9.64□□□□□ -0.87
GPNMB-202ENST00000381990 BAATQ14032 418 aaPredicted RBP9.64□□□□□ -0.87
GPNMB-202ENST00000381990 BMT2Q1RMZ1 405 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 ARHGEF16Q5VV41 709 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 TLDC1Q6P9B6 456 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 METTL13Q8N6R0 699 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 TPCN2Q8NHX9 752 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 FMO2Q99518 471 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 SYT17Q9BSW7 474 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 DDX47Q9H0S4 455 aaKnown RBP9.64□□□□□ -0.87
GPNMB-202ENST00000381990 NEUROG2Q9H2A3 272 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 CCDC134Q9H6E4 229 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 PKD2L1Q9P0L9 805 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 WRAP73Q9P2S5 460 aaPredicted RBP9.64□□□□□ -0.87
GPNMB-202ENST00000381990 SNCAIPQ9Y6H5 919 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 WDR90Q96KV7 1748 aa9.64□□□□□ -0.87
GPNMB-202ENST00000381990 CCDC169A6NNP5 214 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 DDX39AO00148 427 aaKnown RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 DAPK3O43293 454 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 PPP1R12BO60237 982 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 GFPT2O94808 682 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 ATP6V1G2O95670 118 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 P4HBP07237 508 aaKnown RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 MYCLP12524 364 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 GBP1P32455 592 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 CASP5P51878 434 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 ELF3P78545 371 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 ARID5AQ03989 594 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 VGLL4Q14135 290 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 TMEM132BQ14DG7 1078 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 KNOP1Q1ED39 458 aaKnown RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 SPRED3Q2MJR0 410 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 ALKBH5Q6P6C2 394 aaKnown RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 IRF2BP2Q7Z5L9 587 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 MAB21L3Q8N8X9 362 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 ZNF317Q96PQ6 595 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 SPAG5Q96R06 1193 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 TXLNGYQ9BZA5 131 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 SEL1LQ9UBV2 794 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 AMACRQ9UHK6 382 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 TRAF3IP3Q9Y228 551 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 TULP1O00294 542 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 PDXKO00764 312 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 ZBTB39O15060 712 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 CETN3O15182 167 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 CALRP27797 417 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms