RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 AKT1P31749 480 aa6.09□□□□□ -1.43
RFC1-202ENST00000381897 COPS2P61201 443 aa6.09□□□□□ -1.43
RFC1-202ENST00000381897 PKN3Q6P5Z2 889 aa6.09□□□□□ -1.43
RFC1-202ENST00000381897 ARHGAP22Q7Z5H3 698 aa6.09□□□□□ -1.43
RFC1-202ENST00000381897 PHACTR4Q8IZ21 702 aa6.09□□□□□ -1.43
RFC1-202ENST00000381897 AFG1LQ8WV93 481 aa6.09□□□□□ -1.43
RFC1-202ENST00000381897 ACSF2Q96CM8 615 aaPredicted RBP6.09□□□□□ -1.43
RFC1-202ENST00000381897 TTC25Q96NG3 672 aa6.09□□□□□ -1.43
RFC1-202ENST00000381897 ARHGAP9Q9BRR9 750 aa6.09□□□□□ -1.43
RFC1-202ENST00000381897 PIF1Q9H611 641 aa6.09□□□□□ -1.43
RFC1-202ENST00000381897 CEP72Q9P209 647 aa6.09□□□□□ -1.43
RFC1-202ENST00000381897 PPIEQ9UNP9 301 aaKnown RBP6.09□□□□□ -1.43
RFC1-202ENST00000381897 CPS1P31327 1500 aa6.09□□□□□ -1.43
RFC1-202ENST00000381897 TUBAL3A6NHL2 446 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 LZTS3O60299 673 aaPredicted RBP6.09□□□□□ -1.44
RFC1-202ENST00000381897 NOL3O60936 208 aaKnown RBP6.09□□□□□ -1.44
RFC1-202ENST00000381897 ANXA13P27216 316 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 POLR2BP30876 1174 aaKnown RBP6.09□□□□□ -1.44
RFC1-202ENST00000381897 HSD17B3P37058 310 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 ZAP70P43403 619 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 FNTAP49354 379 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 CARSP49589 748 aaKnown RBP6.09□□□□□ -1.44
RFC1-202ENST00000381897 LRRC63Q05C16 580 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 ITGB3BPQ13352 177 aaPredicted RBP6.09□□□□□ -1.44
RFC1-202ENST00000381897 OASLQ15646 514 aaKnown RBP6.09□□□□□ -1.44
RFC1-202ENST00000381897 TTC39BQ5VTQ0 682 aaPredicted RBP6.09□□□□□ -1.44
RFC1-202ENST00000381897 KRT79Q5XKE5 535 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 FAM196AQ6ZSG2 479 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 STX12Q86Y82 276 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 ORAI2Q96SN7 254 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 TRIM31Q9BZY9 425 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 NDST4Q9H3R1 872 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 C6orf50Q9HD87 102 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 PPP1R14DQ9NXH3 145 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 HPS5Q9UPZ3 1129 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 PASKQ96RG2 1323 aa6.09□□□□□ -1.44
RFC1-202ENST00000381897 ZBTB24O43167 697 aaPredicted RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 AP1G1O43747 822 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 FTCDO95954 541 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 TP53P04637 393 aaPredicted RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 PDGFRBP09619 1106 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 GNAT1P11488 350 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 PRCPP42785 496 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 RAD23BP54727 409 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 MEA1Q16626 185 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 SYT16Q17RD7 645 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ZNF790Q6PG37 636 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 BZW1Q7L1Q6 419 aaKnown RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 CCDC25Q86WR0 208 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 TATDN2Q93075 761 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 OMA1Q96E52 524 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 NAF1Q96HR8 494 aaKnown RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 RADILQ96JH8 1075 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 BHMT2Q9H2M3 363 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 USP40Q9NVE5 1235 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 OGDHLQ9ULD0 1010 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 CACNA1FO60840 1977 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 DLG5Q8TDM6 1919 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 AGPSO00116 658 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 MGRN1O60291 552 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 WFS1O76024 890 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ALDH1A1P00352 501 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 H2AFZP0C0S5 128 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 VDRP11473 427 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 PLCG2P16885 1265 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 RPL13P26373 211 aaKnown RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 GNA11P29992 359 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 CDC25AP30304 524 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 PMS2P54278 862 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 FXNQ16595 210 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 TAZQ16635 292 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ZCCHC8Q6NZY4 707 aaKnown RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 TPTE2Q6XPS3 522 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 STXBP4Q6ZWJ1 553 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 H2AFVQ71UI9 128 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ZNF572Q7Z3I7 529 aaPredicted RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 KRT25Q7Z3Z0 450 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 ADSSL1Q8N142 457 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 ANKRD35Q8N283 1001 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 STAG2Q8N3U4 1231 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 TRAPPC9Q96Q05 1148 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 RIOK1Q9BRS2 568 aaKnown RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 NYXQ9GZU5 481 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 EHD4Q9H223 541 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 HSD3B7Q9H2F3 369 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 OLA1Q9NTK5 396 aaKnown RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 GJB4Q9NTQ9 266 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 SLC5A4Q9NY91 659 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 CTNNAL1Q9UBT7 734 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 THRAP3Q9Y2W1 955 aaKnown RBP6.08□□□□□ -1.44
RFC1-202ENST00000381897 DIP2CQ9Y2E4 1556 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 CCDC160A6NGH7 325 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 PODXLO00592 558 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 CHN1P15882 459 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 DR1Q01658 176 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 BFSP1Q12934 665 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.08□□□□□ -1.44
RFC1-202ENST00000381897 SPATA21Q7Z572 469 aa6.08□□□□□ -1.44
RFC1-202ENST00000381897 NBPF15Q8N660 670 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms