RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 NT5C3AQ9H0P0 336 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 CSRNP2Q9H175 543 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZSCAN16Q9H4T2 348 aaPredicted RBP12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 BLOC1S4Q9NUP1 217 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 TYW1Q9NV66 732 aaKnown RBP12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 DNM3Q9UQ16 869 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 PCDHB2Q9Y5E7 798 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 MORC2Q9Y6X9 1032 aaPredicted RBP12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 CNTNAP2Q9UHC6 1331 aa12.77□□□□□ -0.37
APOBEC3F-202ENST00000381565 VWA8A3KMH1 1905 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 SLC26A4O43511 780 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 B4GALT3O60512 393 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 HIP1RO75146 1068 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 PLCG1P19174 1290 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 NASPP49321 788 aaPredicted RBP12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 KARSQ15046 597 aaKnown RBP12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 FAM187BQ17R55 369 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 TCEAL5Q5H9L2 206 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 NOTUMQ6P988 496 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 AGMOQ6ZNB7 445 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 MRPL10Q7Z7H8 261 aaKnown RBP12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 CDR2LQ86X02 465 aaPredicted RBP12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 SYT2Q8N9I0 419 aaPredicted RBP12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 KLHL23Q8NBE8 558 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 KIFAP3Q92845 792 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 CLIC6Q96NY7 704 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 FZD8Q9H461 694 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 ALG13Q9NP73 1137 aaKnown RBP12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 PLAGL2Q9UPG8 496 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 SRPRBQ9Y5M8 271 aaKnown RBP12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 PLXNA3P51805 1871 aa12.76□□□□□ -0.37
APOBEC3F-202ENST00000381565 F13A1P00488 732 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 HSP90AA1P07900 732 aaKnown RBP12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 PLA2G4BP0C869 781 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZSCAN22P10073 491 aaPredicted RBP12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 NCLP19338 710 aaKnown RBP12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 GUCY2CP25092 1073 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 AXLP30530 894 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 SSTR3P32745 418 aaPredicted RBP12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 PBX3P40426 434 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 AFF1P51825 1210 aaKnown RBP12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZP2Q05996 745 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 SLC39A14Q15043 492 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 ARSHQ5FYA8 562 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 SPECC1Q5M775 1068 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 TAS1R3Q7RTX0 852 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 ALYREFQ86V81 257 aaKnown RBP12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 KCTD17Q8N5Z5 321 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 SPPL3Q8TCT6 385 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 FOXD4L4Q8WXT5 416 aaPredicted RBP12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 SLC39A7Q92504 469 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 CCDC51Q96ER9 411 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 EPSTI1Q96J88 318 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 PRIMPOLQ96LW4 560 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 CCSER1Q9C0I3 900 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 NXF3Q9H4D5 531 aaKnown RBP12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 PRMT7Q9NVM4 692 aaPredicted RBP12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 USP20Q9Y2K6 914 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 HES2Q9Y543 173 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 IPPQ9Y573 584 aa12.75□□□□□ -0.37
APOBEC3F-202ENST00000381565 NPHP3-ACAD11A0A0J9YXS1 232 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 A0A1B0GUA9 196 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 OFD1O75665 1012 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 PRKCBP05771 671 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 SKIP12755 728 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 LAG3P18627 525 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 LTBRP36941 435 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 UBA7P41226 1012 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 NPTX2P47972 431 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 RAD51AP2Q09MP3 1159 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 PPP2R5AQ15172 486 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 TIGD5Q53EQ6 642 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 NAALADL2Q58DX5 795 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 ZBTB8OSQ8IWT0 167 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 ABI1Q8IZP0 508 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 LINC00301Q8NCQ3 95 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 RAD54LQ92698 747 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 PABPC5Q96DU9 382 aaKnown RBP12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 CALML4Q96GE6 196 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 CDK5RAP3Q96JB5 506 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 MRPL9Q9BYD2 267 aaKnown RBP12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 LMAN2LQ9H0V9 348 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 C2orf40Q9H1Z8 148 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 PDZD7Q9H5P4 517 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 RSAD1Q9HA92 442 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 TBC1D13Q9NVG8 400 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 ARHGAP28Q9P2N2 729 aa12.74□□□□□ -0.37
APOBEC3F-202ENST00000381565 USP34Q70CQ2 3546 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 PHLPP2Q6ZVD8 1323 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 A0A087X0B3 334 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 INPPL1O15357 1258 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 FGF18O76093 207 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 CSPG5O95196 566 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 NPTXRO95502 500 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 SSBP05455 408 aaKnown RBP eCLIP12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 ALADP13716 330 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 IRS1P35568 1242 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 PEX3P56589 373 aa12.73□□□□□ -0.37
APOBEC3F-202ENST00000381565 MCM6Q14566 821 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms