RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 NLRP9Q7RTR0 991 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 NME8Q8N427 588 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 ARL10Q8N8L6 244 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 PRELID2Q8N945 189 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 POP1Q99575 1024 aaKnown RBP20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 NPHS2Q9NP85 383 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 ZNF711Q9Y462 761 aa20.31■□□□□ 0.84
SMARCD1-201ENST00000381513 LAD1O00515 517 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 CCDC22O60826 627 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 TTLL1O95922 423 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 ASLP04424 464 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 VPS41P49754 854 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 CDK7P50613 346 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 SH3BGRP55822 239 aaPredicted RBP20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 TTC27Q6P3X3 843 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 TRIM59Q8IWR1 403 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 MRRFQ96E11 262 aaKnown RBP20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 NR1H4Q96RI1 486 aaPredicted RBP20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 STARD13Q9Y3M8 1113 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 DIP2BQ9P265 1576 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 EXOC3O60645 756 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 FUT4P22083 530 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 PTGIRP43119 386 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 FAM26FQ5R3K3 315 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 GJB7Q6PEY0 223 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 NAT14Q8WUY8 206 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 WDR60Q8WVS4 1066 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 KRT82Q9NSB4 513 aa20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 TTC7AQ9ULT0 858 aaPredicted RBP20.3■□□□□ 0.84
SMARCD1-201ENST00000381513 DIP2AQ14689 1571 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 TRIP13Q15645 432 aaPredicted RBP20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 ANKRD35Q8N283 1001 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 ZNF512BQ96KM6 892 aaPredicted RBP20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 HAPLN3Q96S86 360 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 MAF1Q9H063 256 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 METTL14Q9HCE5 456 aaKnown RBP20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 NAALADL1Q9UQQ1 740 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 FAM47DPA6NHR8 397 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 COBLL1Q53SF7 1204 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 RBM46Q8TBY0 533 aaKnown RBP20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 FNBP1Q96RU3 617 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 ADAM33Q9BZ11 813 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 BLOC1S4Q9NUP1 217 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 TOM1O60784 492 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 CCDC166P0CW27 439 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 WDR4P57081 412 aaKnown RBP20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 LRRC36Q1X8D7 754 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 CCDC174Q6PII3 467 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 TSPYL2Q9H2G4 693 aaPredicted RBP20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 DDX18Q9NVP1 670 aaKnown RBP20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 STX18Q9P2W9 335 aaKnown RBP20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 HDAC9Q9UKV0 1011 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 RPL26L1Q9UNX3 145 aaKnown RBP20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 GMEB1Q9Y692 573 aa20.29■□□□□ 0.84
SMARCD1-201ENST00000381513 TMEM94Q12767 1356 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 LMO7Q8WWI1 1683 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 MAGEB6P1A0A0J9YX57 407 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 TSPY2A6NKD2 308 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 RFFLQ8WZ73 363 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 DIS3Q9Y2L1 958 aaKnown RBP20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 LRP6O75581 1613 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 DSG1Q02413 1049 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 GRB10Q13322 594 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 R3HDM1Q15032 1099 aaKnown RBP20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 ESCO1Q5FWF5 840 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 SEL1L2Q5TEA6 688 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 CEP70Q8NHQ1 597 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 SNX29Q8TEQ0 813 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 NCSTNQ92542 709 aa20.28■□□□□ 0.84
SMARCD1-201ENST00000381513 IRS4O14654 1257 aaPredicted RBP20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 POTEJP0CG39 1038 aa20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 EIF4BP23588 611 aaKnown RBP20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 STKLD1Q8NE28 680 aa20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 BTBD10Q9BSF8 475 aa20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 A0A0G2JND7 137 aa20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 WDR91A4D1P6 747 aa20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 OR6B1O95007 311 aa20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 CHKAP35790 457 aa20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 CETN2P41208 172 aa20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 PUM3Q15397 648 aaKnown RBP20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 ANGPTL2Q9UKU9 493 aa20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 RIC1Q4ADV7 1423 aa20.27■□□□□ 0.84
SMARCD1-201ENST00000381513 POTEMA6NI47 508 aa20.27■□□□□ 0.83
SMARCD1-201ENST00000381513 GSC2O15499 205 aa20.27■□□□□ 0.83
SMARCD1-201ENST00000381513 SLC5A1P13866 664 aa20.27■□□□□ 0.83
SMARCD1-201ENST00000381513 MARCKSL1P49006 195 aa20.27■□□□□ 0.83
SMARCD1-201ENST00000381513 COASYQ13057 564 aa20.27■□□□□ 0.83
SMARCD1-201ENST00000381513 SPARCL1Q14515 664 aa20.27■□□□□ 0.83
SMARCD1-201ENST00000381513 CFAP61Q8NHU2 1237 aa20.27■□□□□ 0.83
SMARCD1-201ENST00000381513 KRT35Q92764 455 aa20.27■□□□□ 0.83
SMARCD1-201ENST00000381513 FAM161BQ96MY7 647 aa20.27■□□□□ 0.83
SMARCD1-201ENST00000381513 ZNF212Q9UDV6 495 aa20.27■□□□□ 0.83
SMARCD1-201ENST00000381513 IGSF9BQ9UPX0 1349 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 A0A0A6YYK5 440 aaPredicted RBP20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 FYB2Q5VWT5 728 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 PRUNE1Q86TP1 453 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 UBL4BQ8N7F7 174 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 ART4Q93070 314 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 PWWP2AQ96N64 755 aa20.26■□□□□ 0.83
SMARCD1-201ENST00000381513 CCDC77Q9BR77 488 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms