RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 CCDC170Q8IYT3 715 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 DDX12PQ92771 950 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 FAXDC2Q96IV6 333 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 SEC16BQ96JE7 1060 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 MMP19Q99542 508 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 BHMT2Q9H2M3 363 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 GDF3Q9NR23 364 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 PNMA2Q9UL42 364 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 TBX3O15119 743 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 PLA2G4BP0C869 781 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 MYO1EQ12965 1108 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 ANKRD20A8PQ5CZ79 823 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 SV2BQ7L1I2 683 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 KIF2BQ8N4N8 673 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 GPRC5AQ8NFJ5 357 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 CAVIN3Q969G5 261 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 TEKT3Q9BXF9 490 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 TRPM7Q96QT4 1865 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 TTI1O43156 1089 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 TCP1P17987 556 aaKnown RBP12.53□□□□□ -0.4
PITRM1-202ENST00000380989 NEDD9Q14511 834 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 GJC2Q5T442 439 aaPredicted RBP12.53□□□□□ -0.4
PITRM1-202ENST00000380989 ALS2CLQ60I27 953 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 IQCEQ6IPM2 695 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 C6orf89Q6UWU4 347 aa12.53□□□□□ -0.4
PITRM1-202ENST00000380989 FBXO16Q8IX29 292 aaPredicted RBP12.53□□□□□ -0.4
PITRM1-202ENST00000380989 MKI67P46013 3256 aaKnown RBP12.53□□□□□ -0.4
PITRM1-202ENST00000380989 RSPH10B2B2RC85 870 aa12.52□□□□□ -0.4
PITRM1-202ENST00000380989 RSPH10BP0C881 870 aa12.52□□□□□ -0.4
PITRM1-202ENST00000380989 ZBTB48P10074 688 aaPredicted RBP12.52□□□□□ -0.4
PITRM1-202ENST00000380989 EPB41P11171 864 aaKnown RBP12.52□□□□□ -0.4
PITRM1-202ENST00000380989 CCNHP51946 323 aaPredicted RBP12.52□□□□□ -0.4
PITRM1-202ENST00000380989 LY6KQ17RY6 165 aa12.52□□□□□ -0.4
PITRM1-202ENST00000380989 ARSHQ5FYA8 562 aa12.52□□□□□ -0.4
PITRM1-202ENST00000380989 GJB7Q6PEY0 223 aa12.52□□□□□ -0.4
PITRM1-202ENST00000380989 NOX5Q96PH1 765 aa12.52□□□□□ -0.4
PITRM1-202ENST00000380989 HSD17B14Q9BPX1 270 aa12.52□□□□□ -0.4
PITRM1-202ENST00000380989 PDGFCQ9NRA1 345 aa12.52□□□□□ -0.4
PITRM1-202ENST00000380989 TRIM33Q9UPN9 1127 aa12.52□□□□□ -0.4
PITRM1-202ENST00000380989 ATP8A1Q9Y2Q0 1164 aa12.52□□□□□ -0.4
PITRM1-202ENST00000380989 GRID2IPA4D2P6 1211 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 RPA1P27694 616 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 KCTD2Q14681 263 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 LRRC14Q15048 493 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 CYFIP1Q7L576 1253 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 GPBP1Q86WP2 473 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 LXNQ9BS40 222 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 DOCK3Q8IZD9 2030 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 GMNCA6NCL1 334 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 LGR5O75473 907 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 NOL4O94818 638 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 SMTNP53814 917 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 PPP2R5CQ13362 524 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 SNCBQ16143 134 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 PREPLQ4J6C6 727 aaPredicted RBP12.52□□□□□ -0.41
PITRM1-202ENST00000380989 MIER3Q7Z3K6 550 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 CPLX4Q7Z7G2 160 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 RUSC1Q9BVN2 902 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.412e-6■■■■■ 93.4
PITRM1-202ENST00000380989 SLC12A6Q9UHW9 1150 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 PNMA3Q9UL41 463 aa12.52□□□□□ -0.41
PITRM1-202ENST00000380989 AOC2O75106 756 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 ARIH2O95376 493 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 USP8P40818 1118 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 PRPF4BQ13523 1007 aaKnown RBP12.51□□□□□ -0.41
PITRM1-202ENST00000380989 KRT71Q3SY84 523 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 ANKRD23Q86SG2 305 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 MGARPQ8TDB4 240 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 COPS5Q92905 334 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 INPP4AQ96PE3 977 aaPredicted RBP12.51□□□□□ -0.41
PITRM1-202ENST00000380989 LSM14BQ9BX40 385 aaKnown RBP12.51□□□□□ -0.41
PITRM1-202ENST00000380989 CCDC113Q9H0I3 377 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 TMBIM4Q9HC24 238 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 MAP3K20Q9NYL2 800 aaKnown RBP12.51□□□□□ -0.41
PITRM1-202ENST00000380989 ZNFX1Q9P2E3 1918 aaKnown RBP12.51□□□□□ -0.41
PITRM1-202ENST00000380989 FAM155AB1AL88 458 aaPredicted RBP12.51□□□□□ -0.41
PITRM1-202ENST00000380989 CAND2O75155 1236 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 MYZAPP0CAP1 466 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 KCNA2P16389 499 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 ADORA2AP29274 412 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 PAK2Q13177 524 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 ZNF211Q13398 564 aaPredicted RBP12.51□□□□□ -0.41
PITRM1-202ENST00000380989 B3GNT9Q6UX72 402 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 SELENOSQ9BQE4 189 aa12.51□□□□□ -0.41
PITRM1-202ENST00000380989 H0YGN5 161 aa12.5□□□□□ -0.41
PITRM1-202ENST00000380989 SLC12A3P55017 1021 aa12.5□□□□□ -0.41
PITRM1-202ENST00000380989 TAF1CQ15572 869 aaPredicted RBP12.5□□□□□ -0.41
PITRM1-202ENST00000380989 STXBP2Q15833 593 aa12.5□□□□□ -0.41
PITRM1-202ENST00000380989 ASTE1Q2TB18 679 aaPredicted RBP12.5□□□□□ -0.41
PITRM1-202ENST00000380989 PLA2G4FQ68DD2 849 aa12.5□□□□□ -0.41
PITRM1-202ENST00000380989 GLG1Q92896 1179 aa12.5□□□□□ -0.41
PITRM1-202ENST00000380989 HVCN1Q96D96 273 aa12.5□□□□□ -0.41
PITRM1-202ENST00000380989 AGAP1Q9UPQ3 857 aa12.5□□□□□ -0.41
PITRM1-202ENST00000380989 NFS1Q9Y697 457 aa12.5□□□□□ -0.41
PITRM1-202ENST00000380989 ENO4A6NNW6 628 aa12.5□□□□□ -0.41
PITRM1-202ENST00000380989 SART1O43290 800 aaKnown RBP12.5□□□□□ -0.41
PITRM1-202ENST00000380989 CYP11B2P19099 503 aa12.5□□□□□ -0.41
PITRM1-202ENST00000380989 KCNJ2P63252 427 aa12.5□□□□□ -0.41
PITRM1-202ENST00000380989 ERMNQ8TAM6 284 aa12.5□□□□□ -0.41
PITRM1-202ENST00000380989 KCNV2Q8TDN2 545 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms