RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 MAPRE2Q15555 327 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 ADCK5Q3MIX3 580 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 POTEBQ6S5H4 581 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 SCARA5Q6ZMJ2 495 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 TSPAN17Q96FV3 270 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 FAM213AQ9BRX8 229 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 CAPS2Q9BXY5 557 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 NHEJ1Q9H9Q4 299 aaPredicted RBP7.62□□□□□ -1.19
CCDC171-201ENST00000380701 SMYD2Q9NRG4 433 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 PIN4Q9Y237 131 aaKnown RBP7.62□□□□□ -1.19
CCDC171-201ENST00000380701 POC1B-GALNT4F8VUJ3 575 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 NDUFA10O95299 355 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 CSF1RP07333 972 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 VEGFAP15692 232 aaPredicted RBP7.62□□□□□ -1.19
CCDC171-201ENST00000380701 ETFBP38117 255 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 PPP4CP60510 307 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 MTMR2Q13614 643 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 P3H1Q32P28 736 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 FGD4Q96M96 766 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 MYOZ2Q9NPC6 264 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 TMEM63CQ9P1W3 806 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 DSEQ9UL01 958 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 KIAA1257Q9ULG3 409 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 PCDHB6Q9Y5E3 794 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 BCAR1P56945 870 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 INHBEP58166 350 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 PSMC1P62191 440 aaKnown RBP7.62□□□□□ -1.19
CCDC171-201ENST00000380701 SCARF1Q14162 830 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 ELF2Q15723 593 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 BBS9Q3SYG4 887 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.62□□□□□ -1.19
CCDC171-201ENST00000380701 C16orf86Q6ZW13 317 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 SLITRK1Q96PX8 696 aa7.62□□□□□ -1.19
CCDC171-201ENST00000380701 DIP2AQ14689 1571 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 SLC16A4O15374 487 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 PLEKHA8P1O95397 391 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 CHRNA3P32297 505 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 GMPSP49915 693 aaPredicted RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 GTF2A1P52655 376 aaPredicted RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 PTPAQ15257 358 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 TTC19Q6DKK2 380 aaPredicted RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 NOTUMQ6P988 496 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 TMEM270Q6UE05 265 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ACAD11Q709F0 780 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 EFL1Q7Z2Z2 1120 aaKnown RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ZNF677Q86XU0 584 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 REM2Q8IYK8 340 aaPredicted RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 LZICQ8WZA0 190 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 EIF2AK1Q9BQI3 630 aaKnown RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 NDEL1Q9GZM8 345 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 UVRAGQ9P2Y5 699 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 GNA15P30679 374 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 PRKCQQ04759 706 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 SEPT8Q92599 483 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 NRBF2Q96F24 287 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 CDK5RAP1Q96SZ6 601 aaKnown RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 SLC7A5P2Q9GIP4 190 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 SENP1Q9P0U3 644 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 SYNPO2Q9UMS6 1093 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 LRRIQ3A6PVS8 624 aaPredicted RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 GSG1L2A8MUP6 293 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 E5RI56 91 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ARL4DP49703 201 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 RAB27AP51159 221 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ESRRGP62508 458 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 KCNH2Q12809 1159 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ZNF746Q6NUN9 644 aaPredicted RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 SARM1Q6SZW1 724 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 PI16Q6UXB8 463 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 PLEKHH3Q7Z736 793 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 CALML6Q8TD86 181 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 FMO2Q99518 471 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 INTS2Q9H0H0 1204 aaKnown RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 LY9Q9HBG7 655 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 MOSPD1Q9UJG1 213 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ANAPC7Q9UJX3 599 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 TXNDC9O14530 226 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ATP5HO75947 161 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ESRRBO95718 433 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 YWHABP31946 246 aaKnown RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 GNGT1P63211 74 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 PRAMEP78395 509 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 YWHAHQ04917 246 aaPredicted RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 PLD1Q13393 1074 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 TMEM132DQ14C87 1099 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 EDRF1Q3B7T1 1238 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ANGEL2Q5VTE6 544 aaKnown RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 SH3KBP1Q96B97 665 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 EVA1BQ9NVM1 165 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 UBQLN1Q9UMX0 589 aaKnown RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 TSPOAP1O95153 1857 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 CXCL11O14625 94 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 DYNC1LI2O43237 492 aaPredicted RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ZNF500O60304 480 aaPredicted RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 SETSIPP0DME0 302 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 GLI2P10070 1586 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 OXCT1P55809 520 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 RBL2Q08999 1139 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 MUM1Q2TAK8 710 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms