RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 ARID5AQ03989 594 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 DNAJC3Q13217 504 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 ZNF423Q2M1K9 1284 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 ANKDD1AQ495B1 522 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 NADK2Q4G0N4 442 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 WDR45BQ5MNZ6 344 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 ZNF658Q5TYW1 1059 aaPredicted RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 SNRNP48Q6IEG0 339 aaKnown RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 MIER3Q7Z3K6 550 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 UBE2Q1Q7Z7E8 422 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 TTC39CQ8N584 583 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 ZFP28Q8NHY6 868 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 SCHIP1Q9P0W5 487 aaPredicted RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 TMEM59LQ9UK28 342 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 TELO2Q9Y4R8 837 aa9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
NHLRC3-201ENST00000379599 WDR91A4D1P6 747 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 PJA2O43164 708 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 EYA4O95677 639 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 GAS8O95995 478 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 ANPEPP15144 967 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 BCAP31P51572 246 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 ACVR2BQ13705 512 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 ATP1A4Q13733 1029 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 E2F2Q14209 437 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 TNIP1Q15025 636 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 MYLK3Q32MK0 819 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 EPHA10Q5JZY3 1008 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 FBXO31Q5XUX0 539 aaPredicted RBP9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 CLEC4GQ6UXB4 293 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 SH3RF1Q7Z6J0 888 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 MYL10Q9BUA6 226 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 DSCC1Q9BVC3 393 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 PALMDQ9NP74 551 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 CRYBG1Q9Y4K1 1723 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 TMEM94Q12767 1356 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 FAM47E-STBD1D6RA91 191 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 GSC2O15499 205 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 DDHD2O94830 711 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 RPN1P04843 607 aaKnown RBP9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 AMPD1P23109 780 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 TCEA1P23193 301 aaKnown RBP9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 HOXD13P35453 343 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 YARSP54577 528 aaKnown RBP9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 ASPHQ12797 758 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 TMEM266Q2M3C6 531 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 FAM117BQ6P1L5 589 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 PDXDC1Q6P996 788 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 RAB3IL1Q8TBN0 382 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 FAM161BQ96MY7 647 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 GPATCH1Q9BRR8 931 aaKnown RBP9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 HGH1Q9BTY7 390 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 EPB41L4BQ9H329 900 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 CNGB3Q9NQW8 809 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 VPS51Q9UID3 782 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 CCDC188H7C350 402 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 TNFRSF10AO00220 468 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 PSMA7O14818 248 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 EPHB6O15197 1021 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 CNOT3O75175 753 aaKnown RBP9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 ESRRAP11474 423 aaPredicted RBP9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 DDX5P17844 614 aaKnown RBP9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 CDH3P22223 829 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 TUBA1BP68363 451 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 PRKG1Q13976 671 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 PDK3Q15120 406 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 ADRM1Q16186 407 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 TMTC4Q5T4D3 741 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 TUBA1AQ71U36 451 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 MTDHQ86UE4 582 aaKnown RBP9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 SFR1Q86XK3 245 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 FBXO25Q8TCJ0 367 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 OXER1Q8TDS5 423 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 PRICKLE1Q96MT3 831 aaPredicted RBP9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 BTBD10Q9BSF8 475 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 MRPL1Q9BYD6 325 aaKnown RBP9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 CCSER1Q9C0I3 900 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 LIN28AQ9H9Z2 209 aaKnown RBP9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 TBC1D23Q9NUY8 699 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 TBK1Q9UHD2 729 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 MAD1L1Q9Y6D9 718 aa9.06□□□□□ -0.96
NHLRC3-201ENST00000379599 CRB1P82279 1406 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 NBPF26B4DH59 902 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 MCF2LO15068 1137 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 SLC5A2P31639 672 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 COPB2P35606 906 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 MXI1P50539 228 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 CHN2P52757 468 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 CD300CQ08708 224 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 C6orf163Q5TEZ5 329 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 KAZNQ674X7 775 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 ARHGEF18Q6ZSZ5 1173 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 UNC13DQ70J99 1090 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 ZNF804AQ7Z570 1209 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 PPP4R1Q8TF05 950 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 COG3Q96JB2 828 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 CNOT6LQ96LI5 555 aaKnown RBP9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 PRPF18Q99633 342 aaKnown RBP9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 TMEM60Q9H2L4 133 aa9.05□□□□□ -0.96
NHLRC3-201ENST00000379599 SNX25Q9H3E2 840 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms