RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 LGR5O75473 907 aa16.32■□□□□ 0.2
SNX2-201ENST00000379516 H2AFXP16104 143 aaPredicted RBP16.32■□□□□ 0.2
SNX2-201ENST00000379516 FKBP1BP68106 108 aa16.32■□□□□ 0.2
SNX2-201ENST00000379516 TTLL4Q14679 1199 aa16.32■□□□□ 0.2
SNX2-201ENST00000379516 BMS1Q14692 1282 aaKnown RBP16.32■□□□□ 0.2
SNX2-201ENST00000379516 KRT39Q6A163 491 aa16.32■□□□□ 0.2
SNX2-201ENST00000379516 ARMCX2Q7L311 632 aa16.32■□□□□ 0.2
SNX2-201ENST00000379516 USP37Q86T82 979 aa16.32■□□□□ 0.2
SNX2-201ENST00000379516 DNAAF5Q86Y56 855 aa16.32■□□□□ 0.2
SNX2-201ENST00000379516 C2orf69Q8N8R5 385 aa16.32■□□□□ 0.2
SNX2-201ENST00000379516 TMC2Q8TDI7 906 aa16.32■□□□□ 0.2
SNX2-201ENST00000379516 RRAGCQ9HB90 399 aa16.32■□□□□ 0.2
SNX2-201ENST00000379516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.32■□□□□ 0.22e-8■■■■■ 55.9
SNX2-201ENST00000379516 ZNF233A6NK53 670 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 FOXN3O00409 490 aaPredicted RBP16.31■□□□□ 0.2
SNX2-201ENST00000379516 DDX3XO00571 662 aaKnown RBP eCLIP16.31■□□□□ 0.21e-7■□□□□ 11
SNX2-201ENST00000379516 CELF2O95319 508 aaKnown RBP16.31■□□□□ 0.2
SNX2-201ENST00000379516 DLATP10515 647 aaKnown RBP16.31■□□□□ 0.2
SNX2-201ENST00000379516 SCP2P22307 547 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 ADORA2AP29274 412 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 DRP2Q13474 957 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 PLPPR4Q7Z2D5 763 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 TMEM8AQ9HCN3 771 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 TOPORSQ9NS56 1045 aaPredicted RBP16.31■□□□□ 0.2
SNX2-201ENST00000379516 SNX12Q9UMY4 172 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 ZNF185O15231 689 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 EXTL3O43909 919 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 ZSCAN20P17040 1043 aaPredicted RBP16.31■□□□□ 0.2
SNX2-201ENST00000379516 CAPSQ13938 189 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 ZNF792Q3KQV3 632 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 ANKRD23Q86SG2 305 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 ATP8B4Q8TF62 1192 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 U2AF1L4Q8WU68 220 aaKnown RBP16.31■□□□□ 0.2
SNX2-201ENST00000379516 SCFD2Q8WU76 684 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 PRPF31Q8WWY3 499 aaKnown RBP16.31■□□□□ 0.2
SNX2-201ENST00000379516 SUGCTQ9HAC7 445 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 ARGLU1Q9NWB6 273 aaPredicted RBP16.31■□□□□ 0.2
SNX2-201ENST00000379516 PPME1Q9Y570 386 aa16.31■□□□□ 0.2
SNX2-201ENST00000379516 PALMO75781 387 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 GCLCP48506 637 aaPredicted RBP16.3■□□□□ 0.2
SNX2-201ENST00000379516 TUBB4BP68371 445 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 PLCB4Q15147 1175 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 GLYCTKQ8IVS8 523 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 LNX1Q8TBB1 728 aaPredicted RBP16.3■□□□□ 0.2
SNX2-201ENST00000379516 SEMA4DQ92854 862 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 KCNN1Q92952 543 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 VTI1AQ96AJ9 217 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 KIAA1586Q9HCI6 787 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 IVNS1ABPQ9Y6Y0 642 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 ADCY3O60266 1144 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 MATR3P43243 847 aaKnown RBP eCLIP16.3■□□□□ 0.2
SNX2-201ENST00000379516 IER5Q5VY09 327 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 CAGE1Q8TC20 777 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 ZBTB45Q96K62 511 aaPredicted RBP16.3■□□□□ 0.2
SNX2-201ENST00000379516 MMS19Q96T76 1030 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 TARS2Q9BW92 718 aaKnown RBP16.3■□□□□ 0.2
SNX2-201ENST00000379516 TMEM134Q9H6X4 195 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 AGO2Q9UKV8 859 aaKnown RBP16.3■□□□□ 0.2
SNX2-201ENST00000379516 NENFQ9UMX5 172 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 STYXL1Q9Y6J8 313 aa16.3■□□□□ 0.2
SNX2-201ENST00000379516 BTNL10A8MVZ5 291 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 NCK2O43639 380 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 PIGRP01833 764 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 H2AFZP0C0S5 128 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 GTF2H1P32780 548 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 CLCN6P51797 869 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 CKAP4Q07065 602 aaKnown RBP16.29■□□□□ 0.2
SNX2-201ENST00000379516 KIF22Q14807 665 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 SPRYD7Q5W111 196 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 SLFN12LQ6IEE8 588 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 H2AFVQ71UI9 128 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 SV2AQ7L0J3 742 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 PPM1KQ8N3J5 372 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 FBXL13Q8NEE6 735 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 SLC30A5Q8TAD4 765 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 PSPC1Q8WXF1 523 aaKnown RBP16.29■□□□□ 0.2
SNX2-201ENST00000379516 KAT5Q92993 513 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 PARD6BQ9BYG5 372 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 SMARCAD1Q9H4L7 1026 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 RAB20Q9NX57 234 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 MORF4L1Q9UBU8 362 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 TRPC6Q9Y210 931 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 DIS3Q9Y2L1 958 aaKnown RBP16.29■□□□□ 0.2
SNX2-201ENST00000379516 COQ4Q9Y3A0 265 aa16.29■□□□□ 0.2
SNX2-201ENST00000379516 ZBTB42B2RXF5 422 aa16.28■□□□□ 0.2
SNX2-201ENST00000379516 KIAA0391O15091 583 aaKnown RBP16.28■□□□□ 0.2
SNX2-201ENST00000379516 STRNO43815 780 aa16.28■□□□□ 0.2
SNX2-201ENST00000379516 PRLRP16471 622 aa16.28■□□□□ 0.2
SNX2-201ENST00000379516 TNFAIP3P21580 790 aa16.28■□□□□ 0.2
SNX2-201ENST00000379516 USP8P40818 1118 aa16.28■□□□□ 0.2
SNX2-201ENST00000379516 NOP2P46087 812 aaKnown RBP16.28■□□□□ 0.2
SNX2-201ENST00000379516 ACOT2P49753 483 aa16.28■□□□□ 0.2
SNX2-201ENST00000379516 NLRP11P59045 1033 aaKnown RBP16.28■□□□□ 0.2
SNX2-201ENST00000379516 NFRKBQ6P4R8 1299 aa16.28■□□□□ 0.2
SNX2-201ENST00000379516 LRRC71Q8N4P6 559 aa16.28■□□□□ 0.2
SNX2-201ENST00000379516 OLIG1Q8TAK6 271 aa16.28■□□□□ 0.2
SNX2-201ENST00000379516 TAS1R2Q8TE23 839 aa16.28■□□□□ 0.2
SNX2-201ENST00000379516 TCP11Q8WWU5 503 aa16.28■□□□□ 0.2
SNX2-201ENST00000379516 PSMB7Q99436 277 aa16.28■□□□□ 0.2
SNX2-201ENST00000379516 HAPLN2Q9GZV7 340 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms