RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 SYT15Q9BQS2 421 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 PCMTD2Q9NV79 361 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 GTF2IRD1Q9UHL9 959 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 FAM50BQ9Y247 325 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 PCDHGB3Q9Y5G1 929 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 EPHB6O15197 1021 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 PYGLP06737 847 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 HPDP32754 393 aaPredicted RBP7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 MSH2P43246 934 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 COPS2P61201 443 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 MAGOHP61326 146 aaKnown RBP7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 PCNX4Q63HM2 1172 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 TPH2Q8IWU9 490 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 OR2W6PQ8NHA6 318 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 USP33Q8TEY7 942 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 MAGOHBQ96A72 148 aaKnown RBP7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 TMEM237Q96Q45 408 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 EIF2AK1Q9BQI3 630 aaKnown RBP7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 TRIM8Q9BZR9 551 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 YIPF3Q9GZM5 350 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 CABP5Q9NP86 173 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 ABCF3Q9NUQ8 709 aa7.21□□□□□ -1.26
CDKAL1-202ENST00000378610 FAM205CA6NFA0 338 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 EYA4O95677 639 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 RXRAP19793 462 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 CTNNA1P35221 906 aaKnown RBP7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 EIF4A3P38919 411 aaKnown RBP7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 CLK1P49759 484 aaKnown RBP7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 TAF11Q15544 211 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 SLFN11Q7Z7L1 901 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 MICU3Q86XE3 530 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.2□□□□□ -1.262e-6■■■■■ 163.7
CDKAL1-202ENST00000378610 SYNPOQ8N3V7 929 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 LRRC57Q8N9N7 239 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 XAGE3Q8WTP9 111 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 ZNF296Q8WUU4 475 aaPredicted RBP7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 KRT12Q99456 494 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 ELAC2Q9BQ52 826 aaKnown RBP7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 MTFR1LQ9H019 292 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 BLZF1Q9H2G9 400 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 ZDHHC18Q9NUE0 388 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 ZNF358Q9NW07 568 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 UBP1Q9NZI7 540 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 ZSWIM5Q9P217 1185 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 FBXL5Q9UKA1 691 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 STXBP5LQ9Y2K9 1186 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 HCN4Q9Y3Q4 1203 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 KCPQ6ZWJ8 1503 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 GOLGA6L10A0A0M3HER8 536 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 NKRFO15226 690 aaKnown RBP eCLIP7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 ECE2O60344 883 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 UBOX5O94941 541 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 SP100P23497 879 aaPredicted RBP7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 LONP1P36776 959 aaKnown RBP7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 PPP1R2P41236 205 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 TNNC1P63316 161 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 PTK2Q05397 1052 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 SCARF1Q14162 830 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 CHRDL2Q6WN34 429 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 IFNL2Q8IZJ0 200 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 STAG2Q8N3U4 1231 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 B4GALNT2Q8NHY0 566 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 ASAP3Q8TDY4 903 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 SLC39A7Q92504 469 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 PAIP2Q9BPZ3 127 aaKnown RBP7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 SLITRK6Q9H5Y7 841 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 ZWILCHQ9H900 591 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 PIDD1Q9HB75 910 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 CNOT7Q9UIV1 285 aaKnown RBP7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 GMEB1Q9Y692 573 aa7.2□□□□□ -1.26
CDKAL1-202ENST00000378610 GSG1L2A8MUP6 293 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 B4E1Z4 1266 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 IGF2BP3O00425 579 aaKnown RBP eCLIP7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 PLSCR1O15162 318 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 CYP27B1O15528 508 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 PEX11AO75192 247 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 CLTAP09496 248 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 CHN1P15882 459 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 TRIM21P19474 475 aaKnown RBP7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 CCNE1P24864 410 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 ALDH1B1P30837 517 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 HOXA7P31268 230 aaPredicted RBP7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 SEC23AQ15436 765 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 MFSD5Q6N075 450 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 CPLX4Q7Z7G2 160 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 TBC1D1Q86TI0 1168 aaPredicted RBP7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 COL23A1Q86Y22 540 aaPredicted RBP7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 LRRC34Q8IZ02 419 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 USHBP1Q8N6Y0 703 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 LRRC15Q8TF66 581 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 IFT81Q8WYA0 676 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 PRCCQ92733 491 aaPredicted RBP7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 TLE6Q9H808 572 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 MAGEF1Q9HAY2 307 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 RXFP1Q9HBX9 757 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 C2CD2Q9Y426 696 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 SCN7AQ01118 1682 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 SHANK3Q9BYB0 1731 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 LAMB2P55268 1798 aa7.19□□□□□ -1.26
CDKAL1-202ENST00000378610 A0A1W2PRU2 124 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms