RNA–Protein interactions for RNA: ENST00000377806.7

CEACAM1-205, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,773 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-205ENST00000377806 KCNH2Q12809 1159 aa13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 ERCC6LQ2NKX8 1250 aa13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 ZC2HC1CQ53FD0 456 aaPredicted RBP13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 HGSNATQ68CP4 663 aa13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 RRAGAQ7L523 313 aa13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 VSIG10LQ86VR7 867 aa13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 ARL10Q8N8L6 244 aa13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 SYN2Q92777 582 aaPredicted RBP13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 LSM14BQ9BX40 385 aaKnown RBP13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 TRIM4Q9C037 500 aa13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 IKZF4Q9H2S9 585 aa13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 ACAD8Q9UKU7 415 aa13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 TFR2Q9UP52 801 aa13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 SNCAIPQ9Y6H5 919 aa13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 MYPNQ86TC9 1320 aa13.44□□□□□ -0.26
CEACAM1-205ENST00000377806 ARHGEF35A5YM69 484 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 TLR2O60603 784 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 HIP1RO75146 1068 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 QARSP47897 775 aaKnown RBP13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 CASP4P49662 377 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 CLK1P49759 484 aaKnown RBP13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 RARRES1P49788 294 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 AMPD2Q01433 879 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 PPP2R3AQ06190 1150 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 UGCGQ16739 394 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 SUPT20HL1Q3ZLR7 823 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 ARHGEF16Q5VV41 709 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 SNRNP48Q6IEG0 339 aaKnown RBP13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 PADI6Q6TGC4 694 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 NSMFQ6X4W1 530 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 TEKT4Q8WW24 435 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 ZBTB10Q96DT7 871 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 SLC39A3Q9BRY0 314 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 LACRTQ9GZZ8 138 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 TAF1DQ9H5J8 278 aaPredicted RBP13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 DMAC2Q9NW81 257 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 ARMCX3Q9UH62 379 aaPredicted RBP13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 SPDYE16A6NNV3 312 aaPredicted RBP13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 EFCAB8A8MWE9 144 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 LIN7AO14910 233 aaPredicted RBP13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 ATP6V1G1O75348 118 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 MYCLP12524 364 aaPredicted RBP13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 PLA2G4AP47712 749 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 VAV2P52735 878 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 CSE1LP55060 971 aaKnown RBP13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 APBA1Q02410 837 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 TUBB2AQ13885 445 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 FBXO38Q6PIJ6 1188 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 SLC30A9Q6PML9 568 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 RSRC2Q7L4I2 434 aaKnown RBP13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 C4orf19Q8IY42 314 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 GPRASP2Q96D09 838 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 INPP4AQ96PE3 977 aaPredicted RBP13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 TUBB2BQ9BVA1 445 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 PCSK1NQ9UHG2 260 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 CDC23Q9UJX2 597 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 TMED5Q9Y3A6 229 aa13.43□□□□□ -0.26
CEACAM1-205ENST00000377806 POLR2AP24928 1970 aaKnown RBP13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 SSU72P8A0A1W2PR75 194 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 CTAGE9A4FU28 777 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 CLIC2O15247 247 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 RGS20O76081 388 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 AFPP02771 609 aaKnown RBP13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 MAPTP10636 758 aaKnown RBP13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 CCND2P30279 289 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 EPHX2P34913 555 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 EIF4A3P38919 411 aaKnown RBP13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 KIF11P52732 1056 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 CLNS1AP54105 237 aaKnown RBP13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 EAPPQ56P03 285 aaPredicted RBP13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 NUGGCQ68CJ6 796 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 SAPCD2Q86UD0 394 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 KSR1Q8IVT5 923 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 FAM178BQ8IXR5 827 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 GOLGA1Q92805 767 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 SLC35B4Q969S0 331 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 SLC35C1Q96A29 364 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 NAF1Q96HR8 494 aaKnown RBP13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 CCDC42Q96M95 316 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 NAPGQ99747 312 aaPredicted RBP13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 JPH2Q9BR39 696 aaPredicted RBP13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 TEX13BQ9BXU2 312 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 PHACTR1Q9C0D0 580 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 PLCB1Q9NQ66 1216 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 TMCC3Q9ULS5 477 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 GUCA1BQ9UMX6 200 aa13.42□□□□□ -0.26
CEACAM1-205ENST00000377806 A0A0G2JMZ2 1700 aa13.41□□□□□ -0.26
CEACAM1-205ENST00000377806 RBAK-RBAKDNI3L0D1 243 aa13.41□□□□□ -0.26
CEACAM1-205ENST00000377806 ZNF189O75820 626 aaPredicted RBP13.41□□□□□ -0.26
CEACAM1-205ENST00000377806 NR3C2P08235 984 aa13.41□□□□□ -0.26
CEACAM1-205ENST00000377806 EPB41P11171 864 aaKnown RBP13.41□□□□□ -0.26
CEACAM1-205ENST00000377806 FERP16591 822 aa13.41□□□□□ -0.26
CEACAM1-205ENST00000377806 DESP17661 470 aa13.41□□□□□ -0.26
CEACAM1-205ENST00000377806 ENPP1P22413 925 aa13.41□□□□□ -0.26
CEACAM1-205ENST00000377806 MCM3P25205 808 aa13.41□□□□□ -0.26
CEACAM1-205ENST00000377806 SFNP31947 248 aa13.41□□□□□ -0.26
CEACAM1-205ENST00000377806 JAK3P52333 1124 aa13.41□□□□□ -0.26
CEACAM1-205ENST00000377806 KRT76Q01546 638 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms