RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 URGCPQ8TCY9 931 aa21.36■■□□□ 1.01
CBWD3-204ENST00000377349 TNFRSF25Q93038 417 aa21.36■■□□□ 1.01
CBWD3-204ENST00000377349 DYDC2Q96IM9 177 aa21.36■■□□□ 1.01
CBWD3-204ENST00000377349 KLHL5Q96PQ7 755 aa21.36■■□□□ 1.01
CBWD3-204ENST00000377349 MARCH5Q9NX47 278 aa21.36■■□□□ 1.01
CBWD3-204ENST00000377349 INPPL1O15357 1258 aa21.35■■□□□ 1.01
CBWD3-204ENST00000377349 CTTNQ14247 550 aaKnown RBP21.35■■□□□ 1.01
CBWD3-204ENST00000377349 CABP7Q86V35 215 aa21.35■■□□□ 1.01
CBWD3-204ENST00000377349 EXOC8Q8IYI6 725 aa21.35■■□□□ 1.01
CBWD3-204ENST00000377349 RNF149Q8NC42 400 aa21.35■■□□□ 1.01
CBWD3-204ENST00000377349 TMEM175Q9BSA9 504 aa21.35■■□□□ 1.01
CBWD3-204ENST00000377349 SFXN1Q9H9B4 322 aa21.35■■□□□ 1.01
CBWD3-204ENST00000377349 LIMD1Q9UGP4 676 aa21.35■■□□□ 1.01
CBWD3-204ENST00000377349 DBR1Q9UK59 544 aaKnown RBP21.35■■□□□ 1.01
CBWD3-204ENST00000377349 NRP1O14786 923 aa21.34■■□□□ 1.01
CBWD3-204ENST00000377349 GAS2O43903 313 aaKnown RBP21.34■■□□□ 1.01
CBWD3-204ENST00000377349 TSPAN1O60635 241 aa21.34■■□□□ 1.01
CBWD3-204ENST00000377349 POMCP01189 267 aa21.34■■□□□ 1.01
CBWD3-204ENST00000377349 SSBP05455 408 aaKnown RBP eCLIP21.34■■□□□ 1.01
CBWD3-204ENST00000377349 CALCRLQ16602 461 aa21.34■■□□□ 1.01
CBWD3-204ENST00000377349 GPR149Q86SP6 731 aa21.34■■□□□ 1.01
CBWD3-204ENST00000377349 PPFIBP1Q86W92 1011 aa21.34■■□□□ 1.01
CBWD3-204ENST00000377349 SLFN12Q8IYM2 578 aa21.34■■□□□ 1.01
CBWD3-204ENST00000377349 RNF168Q8IYW5 571 aaPredicted RBP21.34■■□□□ 1.01
CBWD3-204ENST00000377349 TMEM105Q8N8V8 129 aa21.34■■□□□ 1.01
CBWD3-204ENST00000377349 EIF2AQ9BY44 585 aaKnown RBP21.34■■□□□ 1.01
CBWD3-204ENST00000377349 LIMCH1Q9UPQ0 1083 aa21.34■■□□□ 1.01
CBWD3-204ENST00000377349 SLITRK3O94933 977 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 ST3GAL1Q11201 340 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 SAFBQ15424 915 aaKnown RBP eCLIP21.33■■□□□ 1.01
CBWD3-204ENST00000377349 XKR9Q5GH70 373 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 TAS1R1Q7RTX1 841 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 TPH2Q8IWU9 490 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 COLGALT2Q8IYK4 626 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 TMEM87AQ8NBN3 555 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 TCP11Q8WWU5 503 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 RNF39Q9H2S5 420 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 ZSWIM4Q9H7M6 989 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 KANSL3Q9P2N6 904 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 FAN1Q9Y2M0 1017 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 IPPQ9Y573 584 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 GVINP1Q7Z2Y8 2422 aa21.33■■□□□ 1.01
CBWD3-204ENST00000377349 DCHS1Q96JQ0 3298 aa21.32■■□□□ 1
CBWD3-204ENST00000377349 VWA8A3KMH1 1905 aa21.32■■□□□ 1
CBWD3-204ENST00000377349 ASAP2O43150 1006 aa21.32■■□□□ 1
CBWD3-204ENST00000377349 ALDH2P05091 517 aa21.32■■□□□ 1
CBWD3-204ENST00000377349 NUBP1P53384 320 aa21.32■■□□□ 1
CBWD3-204ENST00000377349 PTENP60484 403 aa21.32■■□□□ 1
CBWD3-204ENST00000377349 DSC1Q08554 894 aa21.32■■□□□ 1
CBWD3-204ENST00000377349 GNL2Q13823 731 aaKnown RBP21.32■■□□□ 1
CBWD3-204ENST00000377349 AMHR2Q16671 573 aa21.32■■□□□ 1
CBWD3-204ENST00000377349 IFNLR1Q8IU57 520 aaPredicted RBP21.32■■□□□ 1
CBWD3-204ENST00000377349 CCDC43Q96MW1 224 aaKnown RBP21.32■■□□□ 1
CBWD3-204ENST00000377349 MTRQ99707 1265 aa21.32■■□□□ 1
CBWD3-204ENST00000377349 MIOSQ9NXC5 875 aa21.32■■□□□ 1
CBWD3-204ENST00000377349 STK39Q9UEW8 545 aa21.32■■□□□ 1
CBWD3-204ENST00000377349 H0Y858 1186 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 WNT7AO00755 349 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 GALR2O43603 387 aaPredicted RBP21.31■■□□□ 1
CBWD3-204ENST00000377349 NEMFO60524 1076 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 SOD2P04179 222 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 KLRC2P26717 231 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 TXKP42681 527 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 OTUD6AQ7L8S5 288 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 PLCD3Q8N3E9 789 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 ASAP3Q8TDY4 903 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 C8orf76Q96K31 380 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 HSD17B14Q9BPX1 270 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 HERC2P3Q9BVR0 1158 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 EMILIN2Q9BXX0 1053 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 HES2Q9Y543 173 aa21.31■■□□□ 1
CBWD3-204ENST00000377349 ARL5CA6NH57 179 aa21.3■■□□□ 1
CBWD3-204ENST00000377349 F8W810 466 aa21.3■■□□□ 1
CBWD3-204ENST00000377349 LYPLA2O95372 231 aa21.3■■□□□ 1
CBWD3-204ENST00000377349 ITGA4P13612 1032 aa21.3■■□□□ 1
CBWD3-204ENST00000377349 C8orf34Q49A92 452 aa21.3■■□□□ 1
CBWD3-204ENST00000377349 CPB2Q96IY4 423 aa21.3■■□□□ 1
CBWD3-204ENST00000377349 ZFP42Q96MM3 310 aa21.3■■□□□ 1
CBWD3-204ENST00000377349 FAM193BQ96PV7 902 aaPredicted RBP21.3■■□□□ 1
CBWD3-204ENST00000377349 GAD1Q99259 594 aa21.3■■□□□ 1
CBWD3-204ENST00000377349 EIF2AK1Q9BQI3 630 aaKnown RBP21.3■■□□□ 1
CBWD3-204ENST00000377349 MRPL17Q9NRX2 175 aaKnown RBP21.3■■□□□ 1
CBWD3-204ENST00000377349 PCDHA12Q9UN75 941 aa21.3■■□□□ 1
CBWD3-204ENST00000377349 PRG3Q9Y2Y8 225 aaPredicted RBP21.3■■□□□ 1
CBWD3-204ENST00000377349 N4BP1O75113 896 aaKnown RBP21.29■■□□□ 1
CBWD3-204ENST00000377349 ERLIN2O94905 339 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 AXLP30530 894 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 MCM7P33993 719 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 MLH1P40692 756 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 MBTD1Q05BQ5 628 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 POU5F1BQ06416 359 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 CAPSQ13938 189 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 PCBP1Q15365 356 aaKnown RBP eCLIP21.29■■□□□ 1
CBWD3-204ENST00000377349 KIAA0319Q5VV43 1072 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 C15orf39Q6ZRI6 1047 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 FAM184AQ8NB25 1140 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 CNNM3Q8NE01 707 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 GSTCDQ8NEC7 633 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 CCDC51Q96ER9 411 aa21.29■■□□□ 1
CBWD3-204ENST00000377349 RPS6KC1Q96S38 1066 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms