RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 RTP1P59025 263 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 PROCA1Q8NCQ7 364 aaPredicted RBP10.38□□□□□ -0.75
TRIM39-202ENST00000376659 SPIRE2Q8WWL2 714 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 ZNF516Q92618 1163 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 KRT35Q92764 455 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 TLCD1Q96CP7 247 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 GOLGA6AQ9NYA3 693 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 TBX20Q9UMR3 447 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 NEU2Q9Y3R4 380 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 BPTFQ12830 3046 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 ADGRA2Q96PE1 1338 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 EPS15P42566 896 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 BYSLQ13895 437 aaKnown RBP10.38□□□□□ -0.75
TRIM39-202ENST00000376659 CCDC181Q5TID7 509 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 MIER3Q7Z3K6 550 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 VSIG10LQ86VR7 867 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 RDM1Q8NG50 284 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 ACCSQ96QU6 501 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 DDX47Q9H0S4 455 aaKnown RBP10.38□□□□□ -0.75
TRIM39-202ENST00000376659 RAVER2Q9HCJ3 691 aaKnown RBP10.38□□□□□ -0.75
TRIM39-202ENST00000376659 TBC1D22BQ9NU19 505 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.38□□□□□ -0.75
TRIM39-202ENST00000376659 ARHGAP28Q9P2N2 729 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 BCS1LQ9Y276 419 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 PLXNB2O15031 1838 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 IGKV6D-21A0A0A0MT36 114 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 ARHGEF35A5YM69 484 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 TTI1O43156 1089 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 ATG7O95352 703 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 NPTX2P47972 431 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 PRPF4BQ13523 1007 aaKnown RBP10.38□□□□□ -0.75
TRIM39-202ENST00000376659 RASA3Q14644 834 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 PLA2G4FQ68DD2 849 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 POTEAQ6S8J7 498 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 HAUS6Q7Z4H7 955 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 SYCE1Q8N0S2 351 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 PARD3BQ8TEW8 1205 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 ZNF526Q8TF50 670 aaPredicted RBP10.38□□□□□ -0.75
TRIM39-202ENST00000376659 RNPC3Q96LT9 517 aaKnown RBP10.38□□□□□ -0.75
TRIM39-202ENST00000376659 CELF4Q9BZC1 486 aaKnown RBP10.38□□□□□ -0.75
TRIM39-202ENST00000376659 PCYOX1Q9UHG3 505 aa10.38□□□□□ -0.75
TRIM39-202ENST00000376659 RRP15Q9Y3B9 282 aaKnown RBP10.38□□□□□ -0.75
TRIM39-202ENST00000376659 ITGBL1O95965 494 aaPredicted RBP10.37□□□□□ -0.75
TRIM39-202ENST00000376659 CRELD2Q6UXH1 353 aaPredicted RBP10.37□□□□□ -0.75
TRIM39-202ENST00000376659 FAM43BQ6ZT52 329 aaPredicted RBP10.37□□□□□ -0.75
TRIM39-202ENST00000376659 CBWD2Q8IUF1 395 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 EFCAB13Q8IY85 973 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 PRELID2Q8N945 189 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 FAM76AQ8TAV0 307 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 SLCO2A1Q92959 643 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 SGIP1Q9BQI5 828 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 ADAM7Q9H2U9 754 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 ACP6Q9NPH0 428 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 AMACRQ9UHK6 382 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 FRMD4BQ9Y2L6 1034 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 UNGP13051 313 aaPredicted RBP10.37□□□□□ -0.75
TRIM39-202ENST00000376659 CORO7P57737 925 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 TNNC1P63316 161 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 ENOX2Q16206 610 aaKnown RBP10.37□□□□□ -0.75
TRIM39-202ENST00000376659 IFI16Q16666 785 aaKnown RBP10.37□□□□□ -0.75
TRIM39-202ENST00000376659 SCARA3Q6AZY7 606 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 ZNF746Q6NUN9 644 aaPredicted RBP10.37□□□□□ -0.75
TRIM39-202ENST00000376659 SLC47A2Q86VL8 602 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 MCF2L2Q86YR7 1114 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 LARGE2Q8N3Y3 721 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 ATP6V1G3Q96LB4 118 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 ZSWIM1Q9BR11 485 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 HERPUD2Q9BSE4 406 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 MAF1Q9H063 256 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 TMOD2Q9NZR1 351 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 CNTN6Q9UQ52 1028 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 PLAAQ9Y263 795 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 MYPNQ86TC9 1320 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 TCRBV7S2A1N4TA0A589 114 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 DDX39AO00148 427 aaKnown RBP10.37□□□□□ -0.75
TRIM39-202ENST00000376659 MYO1CO00159 1063 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 KIAA0391O15091 583 aaKnown RBP10.37□□□□□ -0.75
TRIM39-202ENST00000376659 PIGRP01833 764 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 IVLP07476 585 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 GZMAP12544 262 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 RXRBP28702 533 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 JAK3P52333 1124 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 OAZ1P54368 228 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 DRG2P55039 364 aaKnown RBP10.37□□□□□ -0.75
TRIM39-202ENST00000376659 PSMC5P62195 406 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 MTMR2Q13614 643 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 PTPROQ16827 1216 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 TCERG1LQ5VWI1 586 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 XRRA1Q6P2D8 792 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 ABHD15Q6UXT9 468 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 DAAM2Q86T65 1068 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 XXYLT1Q8NBI6 393 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 TMC2Q8TDI7 906 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 GPRASP2Q96D09 838 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 RPS6KC1Q96S38 1066 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 PLEKHA4Q9H4M7 779 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 CNOT8Q9UFF9 292 aaKnown RBP10.37□□□□□ -0.75
TRIM39-202ENST00000376659 MROH7Q68CQ1 1323 aa10.37□□□□□ -0.75
TRIM39-202ENST00000376659 DCDC2CA8MYV0 355 aa10.36□□□□□ -0.75
TRIM39-202ENST00000376659 FZD9O00144 591 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms