RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 FDPSP14324 419 aaKnown RBP16.38■□□□□ 0.21
HDAC6-204ENST00000376643 TXKP42681 527 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 RARRES1P49788 294 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 MRE11P49959 708 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 NEK4P51957 841 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 UBXN11Q5T124 520 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 OTOP3Q7RTS5 596 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 ALYREFQ86V81 257 aaKnown RBP16.38■□□□□ 0.21
HDAC6-204ENST00000376643 ZNF280BQ86YH2 543 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 ZBTB8OSQ8IWT0 167 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 GPR65Q8IYL9 337 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 KREMEN2Q8NCW0 462 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 SLC22A17Q8WUG5 538 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 HERC2P3Q9BVR0 1158 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 COLEC11Q9BWP8 271 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 C2orf40Q9H1Z8 148 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 TUFT1Q9NNX1 390 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 GJB4Q9NTQ9 266 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 ZNF318Q5VUA4 2279 aa16.38■□□□□ 0.21
HDAC6-204ENST00000376643 MEIS3P2A8K0S8 358 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 BTBD18B2RXH4 712 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 NRP1O14786 923 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 POMCP01189 267 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 EPCAMP16422 314 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 ARL2P36404 184 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 EARS2Q5JPH6 523 aaKnown RBP16.37■□□□□ 0.21
HDAC6-204ENST00000376643 SLC27A1Q6PCB7 646 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 NECAB1Q8N987 351 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 CMASQ8NFW8 434 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-204ENST00000376643 STAMQ92783 540 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 ASIC4Q96FT7 647 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 KLHL5Q96PQ7 755 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 RPS6KC1Q96S38 1066 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 RHOBTB2Q9BYZ6 727 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 XPNPEP1Q9NQW7 623 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.37■□□□□ 0.21
HDAC6-204ENST00000376643 PRMT7Q9NVM4 692 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-204ENST00000376643 STK24Q9Y6E0 443 aa16.37■□□□□ 0.21
HDAC6-204ENST00000376643 ARL5CA6NH57 179 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 C2CD4DB7Z1M9 353 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 DDHD2O94830 711 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 MUTP22033 750 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 SP100P23497 879 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-204ENST00000376643 OR1G1P47890 313 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 GLUD2P49448 558 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 CLCN4P51793 760 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 MBTD1Q05BQ5 628 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 GRIK3Q13003 919 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 CAPSQ13938 189 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 HAUS3Q68CZ6 603 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 APBB1IPQ7Z5R6 666 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-204ENST00000376643 GPR149Q86SP6 731 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 COLGALT2Q8IYK4 626 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 SMG8Q8ND04 991 aaKnown RBP16.36■□□□□ 0.21
HDAC6-204ENST00000376643 HDAC7Q8WUI4 952 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 AUTS2Q8WXX7 1259 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 MTMR9Q96QG7 549 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 NACC1Q96RE7 527 aa16.36■□□□□ 0.21
HDAC6-204ENST00000376643 LLPHQ9BRT6 129 aaKnown RBP16.36■□□□□ 0.21
HDAC6-204ENST00000376643 POLR3FQ9H1D9 316 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-204ENST00000376643 C5orf42Q9H799 3197 aa16.35■□□□□ 0.21
HDAC6-204ENST00000376643 GLUD1P00367 558 aa16.35■□□□□ 0.21
HDAC6-204ENST00000376643 SSBP05455 408 aaKnown RBP eCLIP16.35■□□□□ 0.21
HDAC6-204ENST00000376643 CNPP09543 421 aaKnown RBP16.35■□□□□ 0.21
HDAC6-204ENST00000376643 ARF4P18085 180 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-204ENST00000376643 MLH1P40692 756 aa16.35■□□□□ 0.21
HDAC6-204ENST00000376643 HMGN5P82970 282 aaKnown RBP16.35■□□□□ 0.21
HDAC6-204ENST00000376643 DSC1Q08554 894 aa16.35■□□□□ 0.21
HDAC6-204ENST00000376643 GNL2Q13823 731 aaKnown RBP16.35■□□□□ 0.21
HDAC6-204ENST00000376643 PPP2R5AQ15172 486 aa16.35■□□□□ 0.21
HDAC6-204ENST00000376643 TMC5Q6UXY8 1006 aa16.35■□□□□ 0.21
HDAC6-204ENST00000376643 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
HDAC6-204ENST00000376643 BCL7CQ8WUZ0 217 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-204ENST00000376643 GAD1Q99259 594 aa16.35■□□□□ 0.21
HDAC6-204ENST00000376643 ADPGKQ9BRR6 497 aa16.35■□□□□ 0.21
HDAC6-204ENST00000376643 LIMCH1Q9UPQ0 1083 aa16.35■□□□□ 0.21
HDAC6-204ENST00000376643 PRG3Q9Y2Y8 225 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-204ENST00000376643 A0A1B0GUA9 196 aa16.34■□□□□ 0.21
HDAC6-204ENST00000376643 FAM205CA6NFA0 338 aa16.34■□□□□ 0.21
HDAC6-204ENST00000376643 LRRIQ4A6NIV6 560 aa16.34■□□□□ 0.21
HDAC6-204ENST00000376643 USO1O60763 962 aaKnown RBP16.34■□□□□ 0.21
HDAC6-204ENST00000376643 GLRA2P23416 452 aa16.34■□□□□ 0.21
HDAC6-204ENST00000376643 AVPR2P30518 371 aa16.34■□□□□ 0.21
HDAC6-204ENST00000376643 TMEM132AQ24JP5 1023 aa16.34■□□□□ 0.21
HDAC6-204ENST00000376643 ASAP3Q8TDY4 903 aa16.34■□□□□ 0.21
HDAC6-204ENST00000376643 CPB2Q96IY4 423 aa16.34■□□□□ 0.21
HDAC6-204ENST00000376643 C8orf76Q96K31 380 aa16.34■□□□□ 0.21
HDAC6-204ENST00000376643 POLR3CQ9BUI4 534 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-204ENST00000376643 EIF2AQ9BY44 585 aaKnown RBP16.34■□□□□ 0.21
HDAC6-204ENST00000376643 RAB34Q9BZG1 259 aa16.34■□□□□ 0.21
HDAC6-204ENST00000376643 FOXP1Q9H334 677 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-204ENST00000376643 MFSD1Q9H3U5 465 aa16.34■□□□□ 0.21
HDAC6-204ENST00000376643 PLEKHA4Q9H4M7 779 aa16.34■□□□□ 0.21
HDAC6-204ENST00000376643 NOL7Q9UMY1 257 aaKnown RBP16.34■□□□□ 0.21
HDAC6-204ENST00000376643 ARID2Q68CP9 1835 aa16.33■□□□□ 0.21
HDAC6-204ENST00000376643 POTEMA6NI47 508 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 N4BP3O15049 544 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 ZBTB39O15060 712 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 LILRB3O75022 631 aa16.33■□□□□ 0.2
HDAC6-204ENST00000376643 OR52Z1P0C646 297 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms