RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 RPS6KC1Q96S38 1066 aa14.67□□□□□ -0.06
CLCN6-205ENST00000376492 TMEM175Q9BSA9 504 aa14.67□□□□□ -0.06
CLCN6-205ENST00000376492 HERC2P3Q9BVR0 1158 aa14.67□□□□□ -0.06
CLCN6-205ENST00000376492 TBC1D17Q9HA65 648 aa14.67□□□□□ -0.06
CLCN6-205ENST00000376492 BMP2KQ9NSY1 1161 aaPredicted RBP14.67□□□□□ -0.06
CLCN6-205ENST00000376492 WNT16Q9UBV4 365 aa14.67□□□□□ -0.06
CLCN6-205ENST00000376492 COL4A3BPQ9Y5P4 624 aa14.67□□□□□ -0.06
CLCN6-205ENST00000376492 STK36Q9NRP7 1315 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 WDR81Q562E7 1941 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 MED19A0JLT2 244 aaPredicted RBP14.66□□□□□ -0.06
CLCN6-205ENST00000376492 LARGE1O95461 756 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 LMNAP02545 664 aaKnown RBP14.66□□□□□ -0.06
CLCN6-205ENST00000376492 ADH1AP07327 375 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 DCNP07585 359 aaKnown RBP14.66□□□□□ -0.06
CLCN6-205ENST00000376492 SPATA31D3P0C874 917 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 SRGAP2CP0DJJ0 459 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 RFX1P22670 979 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 NLRP5P59047 1200 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 GALNT17Q6IS24 598 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 POTEGQ6S5H5 508 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 SPATA31D4Q6ZUB0 917 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 KIAA2013Q8IYS2 634 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 SLC44A3Q8N4M1 653 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 NECAB1Q8N987 351 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 GTF3C6Q969F1 213 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 TMEM143Q96AN5 459 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 ZNF707Q96C28 371 aaPredicted RBP14.66□□□□□ -0.06
CLCN6-205ENST00000376492 B3GALT6Q96L58 329 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 WRAP73Q9P2S5 460 aaPredicted RBP14.66□□□□□ -0.06
CLCN6-205ENST00000376492 EPS15L1Q9UBC2 864 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 STK39Q9UEW8 545 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 LIMCH1Q9UPQ0 1083 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 RBM19Q9Y4C8 960 aaKnown RBP14.66□□□□□ -0.06
CLCN6-205ENST00000376492 CNTNAP2Q9UHC6 1331 aa14.66□□□□□ -0.06
CLCN6-205ENST00000376492 FRYLO94915 3013 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 CYP3A7-CYP3A51PA0A087WV96 503 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 EML1O00423 815 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 EFEMP2O95967 443 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 GLUD1P00367 558 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 SRFP11831 508 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 CYP3A7P24462 503 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 OR1G1P47890 313 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 GLUD2P49448 558 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 PSMC5P62195 406 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 KIAA0319Q5VV43 1072 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 COLGALT2Q8IYK4 626 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 RNF168Q8IYW5 571 aaPredicted RBP14.65□□□□□ -0.06
CLCN6-205ENST00000376492 SMG8Q8ND04 991 aaKnown RBP14.65□□□□□ -0.06
CLCN6-205ENST00000376492 GPR152Q8TDT2 470 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 PRPF31Q8WWY3 499 aaKnown RBP14.65□□□□□ -0.06
CLCN6-205ENST00000376492 SMG7Q92540 1137 aaKnown RBP14.65□□□□□ -0.06
CLCN6-205ENST00000376492 STAMQ92783 540 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 AIFM3Q96NN9 605 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 KANSL3Q9P2N6 904 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 PCDHA4Q9UN74 947 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 NCOR2Q9Y618 2525 aa14.65□□□□□ -0.06
CLCN6-205ENST00000376492 M0R2N6 131 aa14.64□□□□□ -0.07
CLCN6-205ENST00000376492 SLC37A4O43826 429 aa14.64□□□□□ -0.07
CLCN6-205ENST00000376492 FDPSP14324 419 aaKnown RBP14.64□□□□□ -0.07
CLCN6-205ENST00000376492 NCLP19338 710 aaKnown RBP14.64□□□□□ -0.07
CLCN6-205ENST00000376492 MLH1P40692 756 aa14.64□□□□□ -0.07
CLCN6-205ENST00000376492 RABEP1Q15276 862 aa14.64□□□□□ -0.07
CLCN6-205ENST00000376492 GET4Q7L5D6 327 aaPredicted RBP14.64□□□□□ -0.07
CLCN6-205ENST00000376492 DAGLBQ8NCG7 672 aa14.64□□□□□ -0.07
CLCN6-205ENST00000376492 SLC7A3Q8WY07 619 aa14.64□□□□□ -0.07
CLCN6-205ENST00000376492 MBOAT7Q96N66 472 aa14.64□□□□□ -0.07
CLCN6-205ENST00000376492 GAD1Q99259 594 aa14.64□□□□□ -0.07
CLCN6-205ENST00000376492 JPH2Q9BR39 696 aaPredicted RBP14.64□□□□□ -0.07
CLCN6-205ENST00000376492 EIF2AQ9BY44 585 aaKnown RBP14.64□□□□□ -0.07
CLCN6-205ENST00000376492 RXFP1Q9HBX9 757 aa14.64□□□□□ -0.07
CLCN6-205ENST00000376492 DLGAP2Q9P1A6 1054 aa14.64□□□□□ -0.07
CLCN6-205ENST00000376492 ORC3Q9UBD5 711 aaPredicted RBP14.64□□□□□ -0.07
CLCN6-205ENST00000376492 HES2Q9Y543 173 aa14.64□□□□□ -0.07
CLCN6-205ENST00000376492 IPPQ9Y573 584 aa14.64□□□□□ -0.07
CLCN6-205ENST00000376492 ARL5CA6NH57 179 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 ITGA4P13612 1032 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 SCNN1GP51170 649 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 DSG1Q02413 1049 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 DSC1Q08554 894 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 LAMTOR4Q0VGL1 99 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 NONOQ15233 471 aaKnown RBP eCLIP14.63□□□□□ -0.07
CLCN6-205ENST00000376492 NPY5RQ15761 445 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 DGLUCYQ7Z3D6 616 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 SRGAP1Q7Z6B7 1085 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 PALB2Q86YC2 1186 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 GLYCTKQ8IVS8 523 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 NSUN7Q8NE18 718 aaKnown RBP14.63□□□□□ -0.07
CLCN6-205ENST00000376492 PSPC1Q8WXF1 523 aaKnown RBP14.63□□□□□ -0.07
CLCN6-205ENST00000376492 WASF1Q92558 559 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 CEP170P1Q96L14 293 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 ZSCAN31Q96LW9 406 aaPredicted RBP14.63□□□□□ -0.07
CLCN6-205ENST00000376492 ZFP42Q96MM3 310 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 PHF20Q9BVI0 1012 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 RHOBTB2Q9BYZ6 727 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 FOXQ1Q9C009 403 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 DHX33Q9H6R0 707 aaKnown RBP14.63□□□□□ -0.07
CLCN6-205ENST00000376492 ARHGEF3Q9NR81 526 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 MIOSQ9NXC5 875 aa14.63□□□□□ -0.07
CLCN6-205ENST00000376492 DDX25Q9UHL0 483 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms