RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 SEPT14Q6ZU15 432 aa19.29■□□□□ 0.68
TUBGCP3-202ENST00000375669 ELMO3Q96BJ8 720 aa19.29■□□□□ 0.68
TUBGCP3-202ENST00000375669 TXLNGQ9NUQ3 528 aa19.29■□□□□ 0.68
TUBGCP3-202ENST00000375669 DLGAP2Q9P1A6 1054 aa19.29■□□□□ 0.68
TUBGCP3-202ENST00000375669 KLHL14Q9P2G3 628 aa19.29■□□□□ 0.68
TUBGCP3-202ENST00000375669 CTNNAL1Q9UBT7 734 aa19.29■□□□□ 0.68
TUBGCP3-202ENST00000375669 BZW2Q9Y6E2 419 aaKnown RBP19.29■□□□□ 0.68
TUBGCP3-202ENST00000375669 EP400Q96L91 3159 aa19.29■□□□□ 0.68
TUBGCP3-202ENST00000375669 ASTN1O14525 1302 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 RFC5P40937 340 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 STAT1P42224 750 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 RHBDL3P58872 404 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 USH1GQ495M9 461 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 CBWD6Q4V339 395 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 CBWD3Q5JTY5 395 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 CBWD5Q5RIA9 395 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 FAM182BQ5T319 152 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 RNF43Q68DV7 783 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 TTC27Q6P3X3 843 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 BARGINQ6ZT62 677 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 ANKLE1Q8NAG6 615 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 ASAP3Q8TDY4 903 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 CTNNBL1Q8WYA6 563 aaPredicted RBP19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 VCXQ9H320 206 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 TMEM120BA0PK00 339 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 CYP2J2P51589 502 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 JAM2P57087 298 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 PPP4CP60510 307 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 CCDC15Q0P6D6 951 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 EDRF1Q3B7T1 1238 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 MFSD5Q6N075 450 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 ANKRD42Q8N9B4 389 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 OLIG1Q8TAK6 271 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 GDAP1Q8TB36 358 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 SLC20A1Q8WUM9 679 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 DNAJC9Q8WXX5 260 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 BICD1Q96G01 975 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 NUDCD1Q96RS6 583 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 DNAJC12Q9UKB3 198 aa19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 ZBTB12Q9Y330 459 aaPredicted RBP19.28■□□□□ 0.68
TUBGCP3-202ENST00000375669 IRS2Q9Y4H2 1338 aa19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 A0A0A6YYK5 440 aaPredicted RBP19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 ACSL3O95573 720 aa19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 RANBP1P43487 201 aa19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 CLK2P49760 499 aaKnown RBP19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 POLE2P56282 527 aa19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 GSTO1P78417 241 aa19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 DHX34Q14147 1143 aaKnown RBP19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 TRMT1LQ7Z2T5 733 aaKnown RBP19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 FRMD5Q7Z6J6 570 aa19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 CKAP2Q8WWK9 683 aa19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 KIFAP3Q92845 792 aa19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 DDX23Q9BUQ8 820 aaKnown RBP19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 MXD3Q9BW11 206 aa19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 USP40Q9NVE5 1235 aa19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.27■□□□□ 0.68
TUBGCP3-202ENST00000375669 RIPK2O43353 540 aa19.27■□□□□ 0.67
TUBGCP3-202ENST00000375669 TNIP1Q15025 636 aa19.27■□□□□ 0.67
TUBGCP3-202ENST00000375669 ENDOVQ8N8Q3 282 aaKnown RBP19.27■□□□□ 0.67
TUBGCP3-202ENST00000375669 KLHL23Q8NBE8 558 aa19.27■□□□□ 0.67
TUBGCP3-202ENST00000375669 FAM81AQ8TBF8 368 aa19.27■□□□□ 0.67
TUBGCP3-202ENST00000375669 RBM41Q96IZ5 413 aaKnown RBP19.27■□□□□ 0.67
TUBGCP3-202ENST00000375669 LRMDAQ9H2I8 198 aa19.27■□□□□ 0.67
TUBGCP3-202ENST00000375669 GRHL1Q9NZI5 618 aa19.27■□□□□ 0.67
TUBGCP3-202ENST00000375669 PCDHA1Q9Y5I3 950 aa19.27■□□□□ 0.67
TUBGCP3-202ENST00000375669 CHMP2AO43633 222 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 GM2AP17900 193 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 PTDSS1P48651 473 aaKnown RBP19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 NPEPPSP55786 919 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 RNASELQ05823 741 aaKnown RBP19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 ZNF543Q08ER8 600 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 OR52E8Q6IFG1 317 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.26■□□□□ 0.676e-8■□□□□ 10.2
TUBGCP3-202ENST00000375669 ECHDC2Q86YB7 292 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 AGGF1Q8N302 714 aaeCLIP19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 RASAL2Q9UJF2 1139 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 UBAP1LF5GYI3 381 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 GNPATO15228 680 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 GH1P01241 217 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 SPATA31C1P0DKV0 1188 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 HOXA7P31268 230 aaPredicted RBP19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 PRKCIP41743 596 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 TPTE2Q6XPS3 522 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 FAM13CQ8NE31 585 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 DDX4Q9NQI0 724 aaKnown RBP19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 PCMTD2Q9NV79 361 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 LMCD1Q9NZU5 365 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 MTRF1LQ9UGC7 380 aaKnown RBP19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 DNM3Q9UQ16 869 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 ALG6Q9Y672 507 aa19.26■□□□□ 0.67
TUBGCP3-202ENST00000375669 UFL1O94874 794 aa19.25■□□□□ 0.67
TUBGCP3-202ENST00000375669 HOXA13P31271 388 aaPredicted RBP19.25■□□□□ 0.67
TUBGCP3-202ENST00000375669 LMNB2Q03252 620 aa19.25■□□□□ 0.67
TUBGCP3-202ENST00000375669 MAPK7Q13164 816 aa19.25■□□□□ 0.67
TUBGCP3-202ENST00000375669 TBC1D10BQ4KMP7 808 aaPredicted RBP19.25■□□□□ 0.67
TUBGCP3-202ENST00000375669 SLC10A5Q5PT55 438 aa19.25■□□□□ 0.67
TUBGCP3-202ENST00000375669 CGB2Q6NT52 195 aa19.25■□□□□ 0.67
TUBGCP3-202ENST00000375669 VSTM1Q6UX27 236 aa19.25■□□□□ 0.67
TUBGCP3-202ENST00000375669 LONP2Q86WA8 852 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms