RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 RBM5P52756 815 aaKnown RBP eCLIP6.99□□□□□ -1.291e-7■■■□□ 15.1
UBR4-204ENST00000375254 TAF1BQ53T94 588 aaPredicted RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 TRIM64CA6NLI5 447 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 LGALS16A8MUM7 142 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 TLR3O15455 904 aaKnown RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 ATP6V1B1P15313 513 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 CCNHP51946 323 aaPredicted RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 C16orf62Q7Z3J2 963 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 LINS1Q8NG48 757 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 AP3M1Q9Y2T2 418 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 PACS1Q6VY07 963 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 CAMK1DQ8IU85 385 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 BDH2Q9BUT1 245 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 TMBIM4Q9HC24 238 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 ERBINQ96RT1 1412 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 PALMO75781 387 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 AKNAD1Q5T1N1 836 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 PHF11Q9UIL8 331 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 SNAP23O00161 211 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 SRGAP2O75044 1071 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 ZCCHC18P0CG32 403 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 SRGAP2CP0DJJ0 459 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 MYBL1P10243 752 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 HLA-DPA1P20036 260 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 BLMHQ13867 455 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 BLOC1S5Q8TDH9 187 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 CABP2Q9NPB3 220 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 TBK1Q9UHD2 729 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 TRAPPC3O43617 180 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 NOS1APO75052 506 aaPredicted RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 TATP17735 454 aaPredicted RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 PTPN12Q05209 780 aaKnown RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 P2RX5Q93086 422 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 DDX18Q9NVP1 670 aaKnown RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 RABL6Q3YEC7 729 aaPredicted RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 LVRNQ6Q4G3 990 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 AKAP14Q86UN6 197 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 ZNF589Q86UQ0 364 aaPredicted RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 LRWD1Q9UFC0 647 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 FAM32AQ9Y421 112 aaKnown RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 GTF2H1P32780 548 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 ADCY1Q08828 1119 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 SLC10A5Q5PT55 438 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 CDK19Q9BWU1 502 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 ALDH8A1Q9H2A2 487 aaPredicted RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 PCDHA12Q9UN75 941 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 TELO2Q9Y4R8 837 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 XRCC4Q13426 336 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 CCDC85BQ15834 202 aaPredicted RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 PKN2Q16513 984 aaKnown RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 PDZK1Q5T2W1 519 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 MIGA1Q8NAN2 632 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 ZNF556Q9HAH1 456 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 MAPK8IP1Q9UQF2 711 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 M0QX08 132 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 CCNT1O60563 726 aaKnown RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 CDK17Q00537 523 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 AAGABQ6PD74 315 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 RSRC2Q7L4I2 434 aaKnown RBP6.99□□□□□ -1.29
UBR4-204ENST00000375254 NLRP2Q9NX02 1062 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 ENOPH1Q9UHY7 261 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 C4orf22Q6V702 233 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 CYFIP1Q7L576 1253 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 TTC30AQ86WT1 665 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 PANK4Q9NVE7 773 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 GSAPA4D1B5 854 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 LRRC1Q9BTT6 524 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 BBS2Q9BXC9 721 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 CDHR2Q9BYE9 1310 aa6.99□□□□□ -1.29
UBR4-204ENST00000375254 SYNCRIPO60506 623 aaKnown RBP6.98□□□□□ -1.29
UBR4-204ENST00000375254 MAPK4P31152 587 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 SFRP1Q8N474 314 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 ALLCQ8N6M5 410 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 TPRKBQ9Y3C4 175 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 ARHGAP31Q2M1Z3 1444 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 CCDC182A6NF36 153 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 HSPA4LO95757 839 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 IDO1P14902 403 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 ZNF846Q147U1 533 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 TTBK2Q6IQ55 1244 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 ZBTB49Q6ZSB9 765 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 ASZ1Q8WWH4 475 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 RFT1Q96AA3 541 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 VAT1LQ9HCJ6 419 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 SYNPO2Q9UMS6 1093 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 SNX2O60749 519 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 TUFT1Q9NNX1 390 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 PAMP19021 973 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 SLC13A4Q9UKG4 626 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 RPL26P61254 145 aaKnown RBP6.98□□□□□ -1.29
UBR4-204ENST00000375254 HIPK4Q8NE63 616 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 PSTPIP1O43586 416 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 SULT1B1O43704 296 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 SNAP91O60641 907 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 KCNH5Q8NCM2 988 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 JMJD4Q9H9V9 463 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 DMTF1Q9Y222 760 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 CASP5P51878 434 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 EPHB1P54762 984 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms