RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 A0A1B0GUA9 196 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 FRMD3A2A2Y4 597 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 GRXCR1A8MXD5 290 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 C9IYK1 514 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 HNRNPDLO14979 420 aaKnown RBP16.71■□□□□ 0.27
PFDN6-202ENST00000374607 HOXA2O43364 376 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 EOMESO95936 686 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 PRR29P0C7W0 189 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 HARSP12081 509 aaKnown RBP16.71■□□□□ 0.27
PFDN6-202ENST00000374607 HOXA11P31270 313 aaPredicted RBP16.71■□□□□ 0.27
PFDN6-202ENST00000374607 RABGGTBP53611 331 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 GTF2BQ00403 316 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 PSMD2Q13200 908 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 PNOCQ13519 176 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 RAB30Q15771 203 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 AMHR2Q16671 573 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 KMT5BQ4FZB7 885 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 ZBTB33Q86T24 672 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 ECHDC2Q86YB7 292 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 SMARCE1Q969G3 411 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 APOL6Q9BWW8 343 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 ELAC1Q9H777 363 aaKnown RBP16.71■□□□□ 0.27
PFDN6-202ENST00000374607 SLC39A2Q9NP94 309 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 RMND1Q9NWS8 449 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 TMEM161AQ9NX61 479 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 ANKFY1Q9P2R3 1169 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 USP20Q9Y2K6 914 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 INSL6Q9Y581 213 aa16.71■□□□□ 0.27
PFDN6-202ENST00000374607 MICAL3Q7RTP6 2002 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 TULP1O00294 542 aaPredicted RBP16.7■□□□□ 0.26
PFDN6-202ENST00000374607 GJB5O95377 273 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 MYBP10242 640 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 ITGA4P13612 1032 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 DCAF4L1Q3SXM0 396 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 ZNF568Q3ZCX4 644 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 L1TD1Q5T7N2 865 aaKnown RBP16.7■□□□□ 0.26
PFDN6-202ENST00000374607 NT5DC1Q5TFE4 455 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 HPS3Q969F9 1004 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 RAD9AQ99638 391 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 ACO2Q99798 780 aaKnown RBP16.7■□□□□ 0.26
PFDN6-202ENST00000374607 EIF2AQ9BY44 585 aaKnown RBP16.7■□□□□ 0.26
PFDN6-202ENST00000374607 ST6GALNAC4Q9H4F1 302 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 PDZD7Q9H5P4 517 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 TMEM206Q9H813 350 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 LMBRD1Q9NUN5 540 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 PARP2Q9UGN5 583 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 TNFSF13BQ9Y275 285 aa16.7■□□□□ 0.26
PFDN6-202ENST00000374607 CLDN3O15551 220 aa16.69■□□□□ 0.26
PFDN6-202ENST00000374607 PRPF6O94906 941 aaKnown RBP16.69■□□□□ 0.26
PFDN6-202ENST00000374607 KIF20AO95235 890 aa16.69■□□□□ 0.26
PFDN6-202ENST00000374607 SMAD3P84022 425 aaKnown RBP16.69■□□□□ 0.26
PFDN6-202ENST00000374607 DPYDQ12882 1025 aa16.69■□□□□ 0.26
PFDN6-202ENST00000374607 LRIT3Q3SXY7 679 aa16.69■□□□□ 0.26
PFDN6-202ENST00000374607 SPOUT1Q5T280 376 aaKnown RBP16.69■□□□□ 0.26
PFDN6-202ENST00000374607 ZPBP2Q6X784 338 aa16.69■□□□□ 0.26
PFDN6-202ENST00000374607 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
PFDN6-202ENST00000374607 TRAIPQ9BWF2 469 aa16.69■□□□□ 0.26
PFDN6-202ENST00000374607 UBN1Q9NPG3 1134 aa16.69■□□□□ 0.26
PFDN6-202ENST00000374607 PCDHA11Q9Y5I1 949 aa16.69■□□□□ 0.26
PFDN6-202ENST00000374607 TTLL13PA6NNM8 815 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 TBKBP1A7MCY6 615 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 SOX1O00570 391 aaPredicted RBP16.68■□□□□ 0.26
PFDN6-202ENST00000374607 TOM1L1O75674 476 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 YARSP54577 528 aaKnown RBP16.68■□□□□ 0.26
PFDN6-202ENST00000374607 FAM189BP81408 668 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 BTG3Q14201 252 aaPredicted RBP16.68■□□□□ 0.26
PFDN6-202ENST00000374607 CAMK4Q16566 473 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 PAN2Q504Q3 1202 aaKnown RBP16.68■□□□□ 0.26
PFDN6-202ENST00000374607 FAM109BQ6ICB4 259 aaPredicted RBP16.68■□□□□ 0.26
PFDN6-202ENST00000374607 SLFN12LQ6IEE8 588 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 GLB1LQ6UWU2 654 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 MPZL3Q6UWV2 235 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 MAP4K3Q8IVH8 894 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 URGCPQ8TCY9 931 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 LPPQ93052 612 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 FIZ1Q96SL8 496 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 INPP5FQ9Y2H2 1132 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 IPPQ9Y573 584 aa16.68■□□□□ 0.26
PFDN6-202ENST00000374607 EIF3DO15371 548 aaKnown RBP eCLIP16.67■□□□□ 0.26
PFDN6-202ENST00000374607 KLRC4O43908 158 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 ZNF623O75123 536 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 DGKIO75912 1065 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 MBD3O95983 291 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 FGFR1P11362 822 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 CASP5P51878 434 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 KCNB1Q14721 858 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 NOLC1Q14978 699 aaKnown RBP eCLIP16.67■□□□□ 0.26
PFDN6-202ENST00000374607 UBXN11Q5T124 520 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 EEF1DP3Q658K8 133 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 NELFCDQ8IXH7 590 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 ELOA2Q8IYF1 753 aaPredicted RBP16.67■□□□□ 0.26
PFDN6-202ENST00000374607 FIBCD1Q8N539 461 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 HELQQ8TDG4 1101 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 NOC3LQ8WTT2 800 aaKnown RBP16.67■□□□□ 0.26
PFDN6-202ENST00000374607 POMGNT1Q8WZA1 660 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 GSDMAQ96QA5 445 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 RPS6KC1Q96S38 1066 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 CCDC94Q9BW85 323 aaPredicted RBP16.67■□□□□ 0.26
PFDN6-202ENST00000374607 PBX4Q9BYU1 374 aa16.67■□□□□ 0.26
PFDN6-202ENST00000374607 NXF3Q9H4D5 531 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms