RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SPATA31A5Q5VU36 1347 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 SPATA31A7Q8IWB4 1347 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 KBTBD13C9JR72 458 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 FGGP02679 453 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 MAP3K7CLP57077 242 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 ADCY2Q08462 1091 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 BEND6Q5SZJ8 279 aaPredicted RBP15.22■□□□□ 0.03
TRAF1-201ENST00000373887 ACAD11Q709F0 780 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 PDIK1LQ8N165 341 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 CRAMP1Q96RY5 1269 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 KLC2Q9H0B6 622 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 ZFYVE28Q9HCC9 887 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 CCL15-CCL14A0A0B4J2E2 113 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 SERPINI2O75830 405 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 SLC15A2Q16348 729 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 CCL15Q16663 113 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 RAD54LQ92698 747 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 KLHL8Q9P2G9 620 aaPredicted RBP15.22■□□□□ 0.03
TRAF1-201ENST00000373887 FLT1P17948 1338 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 PPARGP37231 505 aaPredicted RBP15.22■□□□□ 0.03
TRAF1-201ENST00000373887 KRT76Q01546 638 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 ACCSLQ4AC99 568 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 BEST2Q8NFU1 509 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 B4GALNT2Q8NHY0 566 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 GCOM2Q9BZD3 368 aaPredicted RBP15.22■□□□□ 0.03
TRAF1-201ENST00000373887 PIN4Q9Y237 131 aaKnown RBP15.22■□□□□ 0.03
TRAF1-201ENST00000373887 POU5F1BQ06416 359 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 SPARCL1Q14515 664 aa15.22■□□□□ 0.03
TRAF1-201ENST00000373887 RPAP1Q9BWH6 1393 aaPredicted RBP15.22■□□□□ 0.03
TRAF1-201ENST00000373887 FAM217BQ9NTX9 383 aaPredicted RBP15.22■□□□□ 0.03
TRAF1-201ENST00000373887 CCNE1P24864 410 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 NEK2P51955 445 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 TNFAIP2Q03169 654 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 NME3Q13232 169 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 RINLQ6ZS11 566 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 GSPT2Q8IYD1 628 aaKnown RBP15.21■□□□□ 0.03
TRAF1-201ENST00000373887 SLC9A2Q9UBY0 812 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 QARSP47897 775 aaKnown RBP15.21■□□□□ 0.03
TRAF1-201ENST00000373887 PAPOLAP51003 745 aaKnown RBP15.21■□□□□ 0.03
TRAF1-201ENST00000373887 PDCLQ13371 301 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 ALS2CLQ60I27 953 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 RNF103-CHMP3A0A140T963 221 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 CCDC159P0C7I6 412 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 ZNF280CQ8ND82 737 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 VPS39Q96JC1 886 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 NDST4Q9H3R1 872 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 DDX28Q9NUL7 540 aaKnown RBP15.21■□□□□ 0.03
TRAF1-201ENST00000373887 HERC5Q9UII4 1024 aaKnown RBP15.21■□□□□ 0.03
TRAF1-201ENST00000373887 DCTN4Q9UJW0 460 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 LZTS1Q9Y250 596 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 CDC42BPBQ9Y5S2 1711 aa15.21■□□□□ 0.03
TRAF1-201ENST00000373887 LDHAP00338 332 aaKnown RBP15.21■□□□□ 0.02
TRAF1-201ENST00000373887 ABCD1P33897 745 aa15.21■□□□□ 0.02
TRAF1-201ENST00000373887 BAATQ14032 418 aaPredicted RBP15.21■□□□□ 0.02
TRAF1-201ENST00000373887 ATG9AQ7Z3C6 839 aa15.21■□□□□ 0.02
TRAF1-201ENST00000373887 RASSF3Q86WH2 238 aa15.21■□□□□ 0.02
TRAF1-201ENST00000373887 CCNYL1Q8N7R7 359 aa15.21■□□□□ 0.02
TRAF1-201ENST00000373887 HEY1Q9Y5J3 304 aa15.21■□□□□ 0.02
TRAF1-201ENST00000373887 RASA4BC9J798 803 aa15.21■□□□□ 0.02
TRAF1-201ENST00000373887 RASA4O43374 803 aa15.21■□□□□ 0.02
TRAF1-201ENST00000373887 ZRANB2O95218 330 aaKnown RBP eCLIP15.21■□□□□ 0.02
TRAF1-201ENST00000373887 DEUP1Q05D60 604 aa15.21■□□□□ 0.02
TRAF1-201ENST00000373887 WDR75Q8IWA0 830 aaKnown RBP15.21■□□□□ 0.02
TRAF1-201ENST00000373887 PPHLN1Q8NEY8 458 aaKnown RBP15.21■□□□□ 0.02
TRAF1-201ENST00000373887 CYP4F11Q9HBI6 524 aa15.21■□□□□ 0.02
TRAF1-201ENST00000373887 CASS4Q9NQ75 786 aa15.21■□□□□ 0.02
TRAF1-201ENST00000373887 ZNF521Q96K83 1311 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 ASB14A6NK59 587 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 ATP8B1O43520 1251 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 CIITAP33076 1130 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 COG2Q14746 738 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 MCPH1Q8NEM0 835 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 EIF2AK1Q9BQI3 630 aaKnown RBP15.2■□□□□ 0.02
TRAF1-201ENST00000373887 TMEM60Q9H2L4 133 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 M0QYV0 167 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 NEMP1O14524 444 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 DIAPH2O60879 1101 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 SRGAP2O75044 1071 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 SEC24DO94855 1032 aaPredicted RBP15.2■□□□□ 0.02
TRAF1-201ENST00000373887 NDUFA10O95299 355 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 COPS2P61201 443 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 COASYQ13057 564 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 DCAF4L1Q3SXM0 396 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 ZNF507Q8TCN5 953 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 TRPC7Q9HCX4 862 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 UBE2Q2LH0YL09 131 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 LMNAP02545 664 aaKnown RBP15.2■□□□□ 0.02
TRAF1-201ENST00000373887 CARSP49589 748 aaKnown RBP15.2■□□□□ 0.02
TRAF1-201ENST00000373887 RWDD2BP57060 319 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 FSCBQ5H9T9 825 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 EPM2AIP1Q7L775 607 aaPredicted RBP15.2■□□□□ 0.02
TRAF1-201ENST00000373887 RNF135Q8IUD6 432 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 ULK4Q96C45 1275 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 KIF12Q96FN5 646 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 DNAJC12Q9UKB3 198 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 TTC7AQ9ULT0 858 aaPredicted RBP15.2■□□□□ 0.02
TRAF1-201ENST00000373887 SNX24Q9Y343 169 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 F8W8V4 182 aa15.2■□□□□ 0.02
TRAF1-201ENST00000373887 P4HBP07237 508 aaKnown RBP15.2■□□□□ 0.02
TRAF1-201ENST00000373887 GAS2L3Q86XJ1 694 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms