RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 MEIS3P2A8K0S8 358 aa20.35■□□□□ 0.85
CDX4-201ENST00000373514 PPP1R37O75864 691 aa20.35■□□□□ 0.85
CDX4-201ENST00000373514 GCNT3O95395 438 aa20.35■□□□□ 0.85
CDX4-201ENST00000373514 NPTXRO95502 500 aa20.35■□□□□ 0.85
CDX4-201ENST00000373514 KCNA1Q09470 495 aa20.35■□□□□ 0.85
CDX4-201ENST00000373514 STRN3Q13033 797 aa20.35■□□□□ 0.85
CDX4-201ENST00000373514 POSTNQ15063 836 aa20.35■□□□□ 0.85
CDX4-201ENST00000373514 PCBP1Q15365 356 aaKnown RBP eCLIP20.35■□□□□ 0.85
CDX4-201ENST00000373514 ECHDC2Q86YB7 292 aa20.35■□□□□ 0.85
CDX4-201ENST00000373514 RNF169Q8NCN4 708 aa20.35■□□□□ 0.85
CDX4-201ENST00000373514 LPPQ93052 612 aa20.35■□□□□ 0.85
CDX4-201ENST00000373514 TOP1MTQ969P6 601 aa20.35■□□□□ 0.85
CDX4-201ENST00000373514 TARS2Q9BW92 718 aaKnown RBP20.35■□□□□ 0.85
CDX4-201ENST00000373514 COL4A4P53420 1690 aaPredicted RBP20.35■□□□□ 0.85
CDX4-201ENST00000373514 A0A1B0GUA9 196 aa20.34■□□□□ 0.85
CDX4-201ENST00000373514 GJB5O95377 273 aa20.34■□□□□ 0.85
CDX4-201ENST00000373514 AXLP30530 894 aa20.34■□□□□ 0.85
CDX4-201ENST00000373514 GTF2BQ00403 316 aa20.34■□□□□ 0.85
CDX4-201ENST00000373514 KMT5BQ4FZB7 885 aa20.34■□□□□ 0.85
CDX4-201ENST00000373514 FAM26FQ5R3K3 315 aa20.34■□□□□ 0.85
CDX4-201ENST00000373514 ATF7IP2Q5U623 682 aa20.34■□□□□ 0.85
CDX4-201ENST00000373514 ZNF720Q7Z2F6 126 aa20.34■□□□□ 0.85
CDX4-201ENST00000373514 STRA6Q9BX79 667 aa20.34■□□□□ 0.85
CDX4-201ENST00000373514 PBX4Q9BYU1 374 aa20.34■□□□□ 0.85
CDX4-201ENST00000373514 TBX20Q9UMR3 447 aa20.34■□□□□ 0.85
CDX4-201ENST00000373514 YBX2Q9Y2T7 364 aaKnown RBP20.34■□□□□ 0.85
CDX4-201ENST00000373514 HES2Q9Y543 173 aa20.34■□□□□ 0.85
CDX4-201ENST00000373514 A0A0U1RQF3 1178 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 PVALEFA0A1B0GWK0 134 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 LCHNA4D1U4 455 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 TISP43B9A030 160 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 H0YCG3 227 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 RPN1P04843 607 aaKnown RBP20.33■□□□□ 0.85
CDX4-201ENST00000373514 FGFR1P11362 822 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 SLC27A1Q6PCB7 646 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 NPAS4Q8IUM7 802 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 SMG8Q8ND04 991 aaKnown RBP20.33■□□□□ 0.85
CDX4-201ENST00000373514 PHOSPHO2Q8TCD6 241 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 ZBTB45Q96K62 511 aaPredicted RBP20.33■□□□□ 0.85
CDX4-201ENST00000373514 TIGD1Q96MW7 591 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 ACO2Q99798 780 aaKnown RBP20.33■□□□□ 0.85
CDX4-201ENST00000373514 MRPL4Q9BYD3 311 aaKnown RBP20.33■□□□□ 0.85
CDX4-201ENST00000373514 NXF3Q9H4D5 531 aaKnown RBP20.33■□□□□ 0.85
CDX4-201ENST00000373514 ST6GALNAC4Q9H4F1 302 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 RNF19AQ9NV58 838 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 IPPQ9Y573 584 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 PCDHB2Q9Y5E7 798 aa20.33■□□□□ 0.85
CDX4-201ENST00000373514 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.32■□□□□ 0.84
CDX4-201ENST00000373514 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.32■□□□□ 0.84
CDX4-201ENST00000373514 ABLIM1O14639 778 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 N4BP3O15049 544 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 PRPF6O94906 941 aaKnown RBP20.32■□□□□ 0.84
CDX4-201ENST00000373514 ARHGEF15O94989 841 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 FAM189BP81408 668 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 LRIT3Q3SXY7 679 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 LRSAM1Q6UWE0 723 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 ZNF598Q86UK7 904 aaKnown RBP20.32■□□□□ 0.84
CDX4-201ENST00000373514 MAP4K3Q8IVH8 894 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 BICD1Q96G01 975 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 ZBED2Q9BTP6 218 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 RC3H2Q9HBD1 1191 aaKnown RBP20.32■□□□□ 0.84
CDX4-201ENST00000373514 SLC39A2Q9NP94 309 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 EXOC1Q9NV70 894 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 TMEM161AQ9NX61 479 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 ANKFY1Q9P2R3 1169 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 KCNG1Q9UIX4 513 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 LRFN2Q9ULH4 789 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 ZMYM2Q9UBW7 1377 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 MYL1P05976 194 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 RAB27AP51159 221 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 NCBP1Q09161 790 aaKnown RBP20.32■□□□□ 0.84
CDX4-201ENST00000373514 HABP4Q5JVS0 413 aaKnown RBP20.32■□□□□ 0.84
CDX4-201ENST00000373514 SLC39A4Q6P5W5 647 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 RBM43Q6ZSC3 357 aaKnown RBP20.32■□□□□ 0.84
CDX4-201ENST00000373514 ZBTB33Q86T24 672 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 KCNN1Q92952 543 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 CCDC51Q96ER9 411 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 LRCH3Q96II8 777 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 TRAIPQ9BWF2 469 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 APOL6Q9BWW8 343 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 HAPLN2Q9GZV7 340 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 CDT1Q9H211 546 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 RNF39Q9H2S5 420 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 PCDHB7Q9Y5E2 793 aa20.32■□□□□ 0.84
CDX4-201ENST00000373514 ANKRD63C9JTQ0 380 aa20.31■□□□□ 0.84
CDX4-201ENST00000373514 HNRNPDLO14979 420 aaKnown RBP20.31■□□□□ 0.84
CDX4-201ENST00000373514 TLL1O43897 1013 aa20.31■□□□□ 0.84
CDX4-201ENST00000373514 HARSP12081 509 aaKnown RBP20.31■□□□□ 0.84
CDX4-201ENST00000373514 ZNF568Q3ZCX4 644 aa20.31■□□□□ 0.84
CDX4-201ENST00000373514 PAN2Q504Q3 1202 aaKnown RBP20.31■□□□□ 0.84
CDX4-201ENST00000373514 CLLU1OSQ5K130 101 aa20.31■□□□□ 0.84
CDX4-201ENST00000373514 L1TD1Q5T7N2 865 aaKnown RBP20.31■□□□□ 0.84
CDX4-201ENST00000373514 KANK3Q6NY19 840 aa20.31■□□□□ 0.84
CDX4-201ENST00000373514 SPRED2Q7Z698 418 aa20.31■□□□□ 0.84
CDX4-201ENST00000373514 CEP120Q8N960 986 aa20.31■□□□□ 0.84
CDX4-201ENST00000373514 KIAA0895Q8NCT3 520 aa20.31■□□□□ 0.84
CDX4-201ENST00000373514 TRIM6Q9C030 488 aaPredicted RBP20.31■□□□□ 0.84
CDX4-201ENST00000373514 PTPRHQ9HD43 1115 aa20.31■□□□□ 0.84
CDX4-201ENST00000373514 HCSTQ9UBK5 93 aa20.31■□□□□ 0.84
CDX4-201ENST00000373514 TNFSF13BQ9Y275 285 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms