RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 HNRNPH2P55795 449 aaKnown RBP20.25■□□□□ 0.83
USP49-202ENST00000373010 TAF3Q5VWG9 929 aa20.25■□□□□ 0.83
USP49-202ENST00000373010 PPM1KQ8N3J5 372 aa20.25■□□□□ 0.83
USP49-202ENST00000373010 RASGEF1CQ8N431 466 aa20.25■□□□□ 0.83
USP49-202ENST00000373010 KIFAP3Q92845 792 aa20.25■□□□□ 0.83
USP49-202ENST00000373010 ACAD9Q9H845 621 aa20.25■□□□□ 0.83
USP49-202ENST00000373010 XPNPEP1Q9NQW7 623 aa20.25■□□□□ 0.83
USP49-202ENST00000373010 SLC9A2Q9UBY0 812 aa20.25■□□□□ 0.83
USP49-202ENST00000373010 KRIT1O00522 736 aa20.25■□□□□ 0.83
USP49-202ENST00000373010 FTLP02792 175 aaPredicted RBP20.25■□□□□ 0.83
USP49-202ENST00000373010 ACTR2P61160 394 aa20.25■□□□□ 0.83
USP49-202ENST00000373010 PARD3BQ8TEW8 1205 aa20.25■□□□□ 0.83
USP49-202ENST00000373010 DDX3YO15523 660 aaKnown RBP20.24■□□□□ 0.83
USP49-202ENST00000373010 ERVK-9P63128 1117 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 PRKCEQ02156 737 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 NNTQ13423 1086 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 SPIRE2Q8WWL2 714 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 HVCN1Q96D96 273 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 PCDHB18PQ96TA0 734 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 TMOD4Q9NZQ9 345 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 LCTP09848 1927 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 SSC5DA1L4H1 1573 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 SPDYE16A6NNV3 312 aaPredicted RBP20.24■□□□□ 0.83
USP49-202ENST00000373010 SART1O43290 800 aaKnown RBP20.24■□□□□ 0.83
USP49-202ENST00000373010 PEX10O60683 326 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 CHRNB2P17787 502 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 DCAF12L1Q5VU92 463 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 NOP9Q86U38 636 aaKnown RBP20.24■□□□□ 0.83
USP49-202ENST00000373010 GOLGA6L1Q8N7Z2 621 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 POMGNT1Q8WZA1 660 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 FAM84AQ96KN4 292 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 CALR3Q96L12 384 aaKnown RBP20.24■□□□□ 0.83
USP49-202ENST00000373010 NTPCRQ9BSD7 190 aaKnown RBP20.24■□□□□ 0.83
USP49-202ENST00000373010 PDLIM7Q9NR12 457 aa20.24■□□□□ 0.83
USP49-202ENST00000373010 CHORDC1Q9UHD1 332 aaPredicted RBP20.24■□□□□ 0.83
USP49-202ENST00000373010 PMM2O15305 246 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 CYP26A1O43174 497 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 SP2Q02086 613 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 KRT39Q6A163 491 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 FAM71AQ8IYT1 594 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 VTI1AQ96AJ9 217 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 NOCTQ9UK39 431 aaKnown RBP20.23■□□□□ 0.83
USP49-202ENST00000373010 ATP2A1O14983 1001 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 HSF2BPO75031 334 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 FSTL1Q12841 308 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 ABHD15Q6UXT9 468 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 SLC47A2Q86VL8 602 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 ZIM3Q96PE6 472 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 SH3GL2Q99962 352 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 ISCUQ9H1K1 167 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 CYP26B1Q9NR63 512 aa20.23■□□□□ 0.83
USP49-202ENST00000373010 MYH9P35579 1960 aaKnown RBP20.23■□□□□ 0.83
USP49-202ENST00000373010 POLR2AP24928 1970 aaKnown RBP20.22■□□□□ 0.83
USP49-202ENST00000373010 NFASCO94856 1347 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 SPATA31C2B4DYI2 1134 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 HIRAP54198 1017 aaPredicted RBP20.22■□□□□ 0.83
USP49-202ENST00000373010 MCCD1P59942 119 aaPredicted RBP20.22■□□□□ 0.83
USP49-202ENST00000373010 MTERF2Q49AM1 385 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 ALS2CLQ60I27 953 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 DLK2Q6UY11 383 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 DDX42Q86XP3 938 aaKnown RBP eCLIP20.22■□□□□ 0.83
USP49-202ENST00000373010 TAS1R2Q8TE23 839 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 EPS8L1Q8TE68 723 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 POLR3FQ9H1D9 316 aaPredicted RBP20.22■□□□□ 0.83
USP49-202ENST00000373010 TMEM8AQ9HCN3 771 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 CTTNBP2NLQ9P2B4 639 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 USP20Q9Y2K6 914 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 AFG3L2Q9Y4W6 797 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 HNRNPDLO14979 420 aaKnown RBP20.22■□□□□ 0.83
USP49-202ENST00000373010 DGAT1O75907 488 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 FGGP02679 453 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 DLATP10515 647 aaKnown RBP20.22■□□□□ 0.83
USP49-202ENST00000373010 ACTN2P35609 894 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 ZSCAN26Q16670 478 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 NAA35Q5VZE5 725 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 TAS1R3Q7RTX0 852 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 MFSD14AQ96MC6 490 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 AMACRQ9UHK6 382 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 NR2E1Q9Y466 385 aa20.22■□□□□ 0.83
USP49-202ENST00000373010 GOLGA6CA6NDK9 693 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 DKC1O60832 514 aaKnown RBP eCLIP20.21■□□□□ 0.83
USP49-202ENST00000373010 GOLGA6DP0CG33 693 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 MFAP3P55082 362 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 CYP24A1Q07973 514 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 PRPF4BQ13523 1007 aaKnown RBP20.21■□□□□ 0.83
USP49-202ENST00000373010 MCPH1Q8NEM0 835 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 HELQQ8TDG4 1101 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 ZNF526Q8TF50 670 aaPredicted RBP20.21■□□□□ 0.83
USP49-202ENST00000373010 SHC3Q92529 594 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 BICD1Q96G01 975 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 FBXL18Q96ME1 805 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 TAF1DQ9H5J8 278 aaPredicted RBP20.21■□□□□ 0.83
USP49-202ENST00000373010 C17orf75Q9HAS0 396 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 ATP6V0A4Q9HBG4 840 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 GOLGA6AQ9NYA3 693 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 GPRC5DQ9NZD1 345 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 TMEM110-MUSTN1A8MSY1 372 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 CCDC188H7C350 402 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 ATMINO43313 823 aaPredicted RBP20.21■□□□□ 0.83
USP49-202ENST00000373010 MMEP08473 750 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms