RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 CHMP2AO43633 222 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 FAM13AO94988 1023 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 MPP2Q14168 576 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 SLMAPQ14BN4 828 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 TRIP13Q15645 432 aaPredicted RBP14.71□□□□□ -0.05
USP49-201ENST00000373006 TPH2Q8IWU9 490 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 RMDN2Q96LZ7 410 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 AGPAT1Q99943 283 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 ZSWIM1Q9BR11 485 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 CDC42EP4Q9H3Q1 356 aaKnown RBP14.71□□□□□ -0.05
USP49-201ENST00000373006 PCYOX1Q9UHG3 505 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 MAST2Q6P0Q8 1798 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 GTF2IP78347 998 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 RINT1Q6NUQ1 792 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 STMN4Q9H169 189 aaPredicted RBP14.71□□□□□ -0.05
USP49-201ENST00000373006 UBE2TQ9NPD8 197 aaPredicted RBP14.71□□□□□ -0.05
USP49-201ENST00000373006 CCNL1Q9UK58 526 aaPredicted RBP14.71□□□□□ -0.05
USP49-201ENST00000373006 ATAD5Q96QE3 1844 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 ZMYM2Q9UBW7 1377 aa14.71□□□□□ -0.05
USP49-201ENST00000373006 EP400Q96L91 3159 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 FAM196BA6NMK8 535 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 CTNNA2P26232 953 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 HOXA13P31271 388 aaPredicted RBP14.71□□□□□ -0.06
USP49-201ENST00000373006 COILP38432 576 aaPredicted RBP14.71□□□□□ -0.06
USP49-201ENST00000373006 GABPAQ06546 454 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 BNIP1Q12981 228 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 GRAPQ13588 217 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 BMT2Q1RMZ1 405 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 GALNTL6Q49A17 601 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 SEL1L2Q5TEA6 688 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 CAPRIN2Q6IMN6 1127 aaKnown RBP14.71□□□□□ -0.06
USP49-201ENST00000373006 VSTM1Q6UX27 236 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 GRAPLQ8TC17 118 aaPredicted RBP14.71□□□□□ -0.06
USP49-201ENST00000373006 C1orf54Q8WWF1 131 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 ART4Q93070 314 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 PWWP2AQ96N64 755 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 SERPINB13Q9UIV8 391 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 DAGLAQ9Y4D2 1042 aa14.71□□□□□ -0.06
USP49-201ENST00000373006 IGKV6D-41A0A0C4DH26 115 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 OAS1P00973 400 aaKnown RBP14.7□□□□□ -0.06
USP49-201ENST00000373006 MSH2P43246 934 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 TNFAIP8L3Q5GJ75 292 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 GPATCH4Q5T3I0 446 aaKnown RBP14.7□□□□□ -0.06
USP49-201ENST00000373006 BTNL9Q6UXG8 535 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 SPATA21Q7Z572 469 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 CCHCR1Q8TD31 782 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 RPGRQ92834 1020 aaKnown RBP14.7□□□□□ -0.06
USP49-201ENST00000373006 SAAL1Q96ER3 474 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 NAP1L4Q99733 375 aaKnown RBP14.7□□□□□ -0.06
USP49-201ENST00000373006 EIF2AK1Q9BQI3 630 aaKnown RBP14.7□□□□□ -0.06
USP49-201ENST00000373006 TAOK3Q9H2K8 898 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 ARHGEF10LQ9HCE6 1279 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 PARP2Q9UGN5 583 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 CYP3A7-CYP3A51PA0A087WV96 503 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 MSH4O15457 936 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 DLATP10515 647 aaKnown RBP14.7□□□□□ -0.06
USP49-201ENST00000373006 CYP3A7P24462 503 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 CHKAP35790 457 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 PEX5P50542 639 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 DLG4P78352 724 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 IRX1P78414 480 aaPredicted RBP14.7□□□□□ -0.06
USP49-201ENST00000373006 CALCOCO2Q13137 446 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 KYNUQ16719 465 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 RHOT2Q8IXI1 618 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 RPUSD2Q8IZ73 545 aaKnown RBP14.7□□□□□ -0.06
USP49-201ENST00000373006 CNBD1Q8NA66 436 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 SLC17A8Q8NDX2 589 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 TBC1D16Q8TBP0 767 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 TBC1D22AQ8WUA7 517 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 LENG9Q96B70 501 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 FRMD4BQ9Y2L6 1034 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 ATP8B3O60423 1300 aa14.7□□□□□ -0.06
USP49-201ENST00000373006 RPS6KA4O75676 772 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 SCNN1DP51172 638 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 MYL7Q01449 175 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.69□□□□□ -0.06
USP49-201ENST00000373006 SPOPO43791 374 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 ALADP13716 330 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 CCND1P24385 295 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 VPS41P49754 854 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 NSMFQ6X4W1 530 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 FAM47EQ6ZV65 393 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 KAT5Q92993 513 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 TMEM109Q9BVC6 243 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 PCIF1Q9H4Z3 704 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 ADAM22Q9P0K1 906 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 MIF4GDA9UHW6 222 aaKnown RBP14.69□□□□□ -0.06
USP49-201ENST00000373006 EXOC3O60645 756 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 BRAFP15056 766 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 ZNF76P36508 570 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 INHBEP58166 350 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 GPC5P78333 572 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 CYP4X1Q8N118 509 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 TGS1Q96RS0 853 aaKnown RBP14.69□□□□□ -0.06
USP49-201ENST00000373006 PAIP2Q9BPZ3 127 aaKnown RBP14.69□□□□□ -0.06
USP49-201ENST00000373006 AAASQ9NRG9 546 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 ARL2BPQ9Y2Y0 163 aa14.69□□□□□ -0.06
USP49-201ENST00000373006 FRMPD4Q14CM0 1322 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 PASKQ96RG2 1323 aa14.68□□□□□ -0.06
USP49-201ENST00000373006 CLDN3O15551 220 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms