RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PLA2G4BP0C869 781 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 PYGMP11217 842 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 RFC5P40937 340 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 PRPHP41219 470 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 RAD23BP54727 409 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 DNAJC3Q13217 504 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 PICALMQ13492 652 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 ITPK1Q13572 414 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 CERKLQ49MI3 558 aaPredicted RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 CBWD6Q4V339 395 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 EPC2Q52LR7 807 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 CBWD3Q5JTY5 395 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 KIAA1755Q5JYT7 1200 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 CBWD5Q5RIA9 395 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 INTS5Q6P9B9 1019 aaKnown RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 CCDC26Q8TAB7 109 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 CYP2W1Q8TAV3 490 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 PIGOQ8TEQ8 1089 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 ARHGEF2Q92974 986 aaKnown RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 SAAL1Q96ER3 474 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 PRR11Q96HE9 360 aaPredicted RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 HES6Q96HZ4 224 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 PBKQ96KB5 322 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 HERPUD2Q9BSE4 406 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 TRIM7Q9C029 511 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 MYLK2Q9H1R3 596 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 C6orf50Q9HD87 102 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 USP15Q9Y4E8 981 aaPredicted RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 ZNF804BA4D1E1 1349 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 TNS2Q63HR2 1409 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 WDR91A4D1P6 747 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 TP73O15350 636 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 FGFR1OPO95684 399 aaKnown RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 GHRP10912 638 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 FGFR1P11362 822 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 CD46P15529 392 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 ATP2A2P16615 1042 aaKnown RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 CYP11B2P19099 503 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 NMT1P30419 496 aaKnown RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 PTGIRP43119 386 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 PSMC4P43686 418 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 CYP2J2P51589 502 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 DLG4P78352 724 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 MYBPC2Q14324 1141 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 SGSM1Q2NKQ1 1148 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 KRT25Q7Z3Z0 450 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 SCUBE3Q8IX30 993 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 SDR16C5Q8N3Y7 309 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 CNBD1Q8NA66 436 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 DTX3LQ8TDB6 740 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 ERP27Q96DN0 273 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 C9orf72Q96LT7 481 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 TGS1Q96RS0 853 aaKnown RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 EYA3Q99504 573 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 REEP2Q9BRK0 252 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 PPP1R12CQ9BZL4 782 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 CDC42EP4Q9H3Q1 356 aaKnown RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 SPATS2LQ9NUQ6 558 aaKnown RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 IRAK4Q9NWZ3 460 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 RGL1Q9NZL6 768 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 ARMCX3Q9UH62 379 aaPredicted RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 DDX25Q9UHL0 483 aaKnown RBP5.83□□□□□ -1.48
ATG4A-204ENST00000372246 AMFRQ9UKV5 643 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 GRID1Q9ULK0 1009 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 PVALEFA0A1B0GWK0 134 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 USP17L10C9JJH3 530 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 CLDN3O15551 220 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 ASAP2O43150 1006 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 TOM1O60784 492 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 SMIM24O75264 130 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 BANF1O75531 89 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 CAMTA2O94983 1202 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 MYL1P05976 194 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 PCK1P35558 622 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 POLE2P56282 527 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 PTENP60484 403 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 UBXN2AP68543 259 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 OVGP1Q12889 678 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 BNIP1Q12981 228 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 MTMR2Q13614 643 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 MTMR3Q13615 1198 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 DRAP1Q14919 205 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-204ENST00000372246 EPHA7Q15375 998 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 GALNTL6Q49A17 601 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 MORN1Q5T089 497 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 FOXB2Q5VYV0 432 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 CYP4F22Q6NT55 531 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 CCDC137Q6PK04 289 aaKnown RBP5.82□□□□□ -1.48
ATG4A-204ENST00000372246 PTF1AQ7RTS3 328 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 SPATA21Q7Z572 469 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 CCDC50Q8IVM0 306 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 CCDC105Q8IYK2 499 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 RASGEF1CQ8N431 466 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 SHKBP1Q8TBC3 707 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 MAGEC3Q8TD91 643 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 NAF1Q96HR8 494 aaKnown RBP5.82□□□□□ -1.48
ATG4A-204ENST00000372246 AK8Q96MA6 479 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 MTA3Q9BTC8 594 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 HEMGNQ9BXL5 484 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 KIAA1683Q9H0B3 1180 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms