RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 LINC00116Q8NCU8 138 aa12.22□□□□□ -0.45
PTCH2-201ENST00000372192 ARHGEF1Q92888 912 aaKnown RBP12.22□□□□□ -0.45
PTCH2-201ENST00000372192 TRAIPQ9BWF2 469 aa12.22□□□□□ -0.45
PTCH2-201ENST00000372192 MAK16Q9BXY0 300 aaKnown RBP12.22□□□□□ -0.45
PTCH2-201ENST00000372192 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.22□□□□□ -0.45
PTCH2-201ENST00000372192 PPFIA2O75334 1257 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 UBOX5O94941 541 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 MARSP56192 900 aaKnown RBP12.21□□□□□ -0.45
PTCH2-201ENST00000372192 KYNUQ16719 465 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.21□□□□□ -0.45
PTCH2-201ENST00000372192 SYDE1Q6ZW31 735 aaPredicted RBP12.21□□□□□ -0.45
PTCH2-201ENST00000372192 RPS6KC1Q96S38 1066 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 TUBB6Q9BUF5 446 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 FOXN3O00409 490 aaPredicted RBP12.21□□□□□ -0.45
PTCH2-201ENST00000372192 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.45
PTCH2-201ENST00000372192 CYP26A1O43174 497 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 RINT1Q6NUQ1 792 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 ATL2Q8NHH9 583 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 HAS1Q92839 578 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 GBP5Q96PP8 586 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 POLR3CQ9BUI4 534 aaPredicted RBP12.21□□□□□ -0.45
PTCH2-201ENST00000372192 RUSC1Q9BVN2 902 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 BCS1LQ9Y276 419 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 KCPQ6ZWJ8 1503 aa12.21□□□□□ -0.45
PTCH2-201ENST00000372192 SGK1O00141 431 aa12.21□□□□□ -0.46
PTCH2-201ENST00000372192 SKIP12755 728 aa12.21□□□□□ -0.46
PTCH2-201ENST00000372192 DRD4P21917 467 aa12.21□□□□□ -0.46
PTCH2-201ENST00000372192 IFI35P80217 286 aaPredicted RBP12.21□□□□□ -0.46
PTCH2-201ENST00000372192 DDX23Q9BUQ8 820 aaKnown RBP12.21□□□□□ -0.46
PTCH2-201ENST00000372192 LMNAP02545 664 aaKnown RBP12.2□□□□□ -0.46
PTCH2-201ENST00000372192 PEX3P56589 373 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 PSMC6P62333 389 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 QPCTQ16769 361 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 CENPUQ71F23 418 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 TTC25Q96NG3 672 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 AGPAT3Q9NRZ7 376 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 M0R2N6 131 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 ALDH1B1P30837 517 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 LIG4P49917 911 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 CACNB3P54284 484 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 RAD23BP54727 409 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 ELF3P78545 371 aaPredicted RBP12.2□□□□□ -0.46
PTCH2-201ENST00000372192 IZUMO3Q5VZ72 239 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 KRT39Q6A163 491 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 CTAGE3PQ8IX95 158 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.2□□□□□ -0.46
PTCH2-201ENST00000372192 LXNQ9BS40 222 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 YIPF3Q9GZM5 350 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 KCNG1Q9UIX4 513 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 UBE4BO95155 1302 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 PLS3P13797 630 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 NUDCD1Q96RS6 583 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 KCTD10Q9H3F6 313 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.2□□□□□ -0.46
PTCH2-201ENST00000372192 STOML1Q9UBI4 398 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 CHORDC1Q9UHD1 332 aaPredicted RBP12.2□□□□□ -0.46
PTCH2-201ENST00000372192 CASZ1Q86V15 1759 aa12.2□□□□□ -0.46
PTCH2-201ENST00000372192 WDR91A4D1P6 747 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
PTCH2-201ENST00000372192 RASA3Q14644 834 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 NLRX1Q86UT6 975 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 HES6Q96HZ4 224 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 PAGR1Q9BTK6 254 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 KMT5AQ9NQR1 393 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 OLFML3Q9NRN5 406 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 SCOCQ9UIL1 159 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 SUGT1Q9Y2Z0 365 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 USH1CQ9Y6N9 552 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 MYH15Q9Y2K3 1946 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
PTCH2-201ENST00000372192 NUDT17P0C025 328 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 FLT3P36888 993 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 ZCWPW2Q504Y3 356 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 BRDTQ58F21 947 aaPredicted RBP12.19□□□□□ -0.46
PTCH2-201ENST00000372192 KCNV1Q6PIU1 500 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 AGGF1Q8N302 714 aaeCLIP12.19□□□□□ -0.46
PTCH2-201ENST00000372192 PDCD7Q8N8D1 485 aaKnown RBP12.19□□□□□ -0.46
PTCH2-201ENST00000372192 C9orf72Q96LT7 481 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 CSRNP1Q96S65 589 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 CDC42EP4Q9H3Q1 356 aaKnown RBP12.19□□□□□ -0.46
PTCH2-201ENST00000372192 KCND2Q9NZV8 630 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 ZFP69BQ9UJL9 534 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 PCDHB4Q9Y5E5 795 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 FAM47DPA6NHR8 397 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 UBAP1LF5GYI3 381 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 O00370 1275 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 RIPK2O43353 540 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 GH2P01242 217 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 KRT1P04264 644 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 SCP2P22307 547 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 PIK3CAP42336 1068 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 MSH2P43246 934 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 CASP5P51878 434 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 SLC12A3P55017 1021 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 PPP1R2P3Q6NXS1 205 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 CFAP61Q8NHU2 1237 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 ZNF384Q8TF68 577 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 ERP27Q96DN0 273 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 STAMBPL1Q96FJ0 436 aa12.19□□□□□ -0.46
PTCH2-201ENST00000372192 RILPQ96NA2 401 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms