RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 FOCADQ5VW36 1801 aa18.41■□□□□ 0.54
VEGFA-205ENST00000372067 STRN3Q13033 797 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.4■□□□□ 0.54
VEGFA-205ENST00000372067 RPUSD2Q8IZ73 545 aaKnown RBP18.4■□□□□ 0.54
VEGFA-205ENST00000372067 KAT5Q92993 513 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 TEX13BQ9BXU2 312 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 DPH5Q9H2P9 285 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 ACAD9Q9H845 621 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 JPH1Q9HDC5 661 aaPredicted RBP18.4■□□□□ 0.54
VEGFA-205ENST00000372067 ZMYM2Q9UBW7 1377 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 TARSL2A2RTX5 802 aaKnown RBP18.4■□□□□ 0.54
VEGFA-205ENST00000372067 AFAP1L1Q8TED9 768 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 SLC20A1Q8WUM9 679 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 CABS1Q96KC9 395 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 TOPORSQ9NS56 1045 aaPredicted RBP18.4■□□□□ 0.54
VEGFA-205ENST00000372067 CSADQ9Y600 493 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 PPP3CAQ08209 521 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 PAK2Q13177 524 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 MMGT1Q8N4V1 131 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 FAM71BQ8TC56 605 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 TMEM143Q96AN5 459 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 MTFR1LQ9H019 292 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 ACP6Q9NPH0 428 aa18.4■□□□□ 0.54
VEGFA-205ENST00000372067 SPOPO43791 374 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 DKC1O60832 514 aaKnown RBP eCLIP18.39■□□□□ 0.53
VEGFA-205ENST00000372067 NPTX2P47972 431 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 MAPK7Q13164 816 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 USP37Q86T82 979 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 APOBEC3FQ8IUX4 373 aaKnown RBP18.39■□□□□ 0.53
VEGFA-205ENST00000372067 DEPTORQ8TB45 409 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 SLC35G2Q8TBE7 412 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 SLC9A2Q9UBY0 812 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 DHX15O43143 795 aaKnown RBP18.39■□□□□ 0.53
VEGFA-205ENST00000372067 CYP26A1O43174 497 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 MUTP22033 750 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 GJC1P36383 396 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 ALCAMQ13740 583 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 CRYMQ14894 314 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 SNRNP35Q16560 246 aaKnown RBP18.39■□□□□ 0.53
VEGFA-205ENST00000372067 SUPT20HL1Q3ZLR7 823 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 ARHGEF19Q8IW93 802 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 ZNF668Q96K58 619 aaPredicted RBP18.39■□□□□ 0.53
VEGFA-205ENST00000372067 SIX2Q9NPC8 291 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 PGRMC1O00264 195 aaKnown RBP18.39■□□□□ 0.53
VEGFA-205ENST00000372067 FTLP02792 175 aaPredicted RBP18.39■□□□□ 0.53
VEGFA-205ENST00000372067 CNGA1P29973 690 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 CARSP49589 748 aaKnown RBP18.39■□□□□ 0.53
VEGFA-205ENST00000372067 MEI1Q5TIA1 1274 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 KCTD16Q68DU8 428 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 PHLDB3Q6NSJ2 640 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 FMNL3Q8IVF7 1028 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 TPCN2Q8NHX9 752 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 POLR3FQ9H1D9 316 aaPredicted RBP18.39■□□□□ 0.53
VEGFA-205ENST00000372067 PNMA2Q9UL42 364 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 CAPN7Q9Y6W3 813 aa18.39■□□□□ 0.53
VEGFA-205ENST00000372067 UBE4BO95155 1302 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 ZNF541Q9H0D2 1346 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 GOLGA6CA6NDK9 693 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 ANKRD63C9JTQ0 380 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 SYF2O95926 243 aaKnown RBP18.38■□□□□ 0.53
VEGFA-205ENST00000372067 GOLGA6DP0CG33 693 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 MARK3P27448 753 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 NF2P35240 595 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 PRKCEQ02156 737 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 NT5C1BQ96P26 610 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 PI4K2AQ9BTU6 479 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 KIF9Q9HAQ2 790 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 GOLGA6AQ9NYA3 693 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 HPCAL4Q9UM19 191 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 ATMINO43313 823 aaPredicted RBP18.38■□□□□ 0.53
VEGFA-205ENST00000372067 FAM163BP0C2L3 166 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 PRLRP16471 622 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 WLSQ5T9L3 541 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 THAP2Q9H0W7 228 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 TAS2R14Q9NYV8 317 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 RNF14Q9UBS8 474 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 TBX20Q9UMR3 447 aa18.38■□□□□ 0.53
VEGFA-205ENST00000372067 GOLGA6L10A6NI86 522 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 ZNF131P52739 623 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 EPHB4P54760 987 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 MIS18BP1Q6P0N0 1132 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 C4orf19Q8IY42 314 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 LNX1Q8TBB1 728 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-205ENST00000372067 GLG1Q92896 1179 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 AGPAT1Q99943 283 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 HOXC10Q9NYD6 342 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 RBAK-RBAKDNI3L0D1 243 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 BUB1BO60566 1050 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-205ENST00000372067 FGGP02679 453 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 CNTN2Q02246 1040 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 TMEM132BQ14DG7 1078 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 SULF1Q8IWU6 871 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 METTL13Q8N6R0 699 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 FAM76AQ8TAV0 307 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 DBR1Q9UK59 544 aaKnown RBP18.37■□□□□ 0.53
VEGFA-205ENST00000372067 QSER1Q2KHR3 1735 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 GTPBP10A4D1E9 387 aaKnown RBP18.37■□□□□ 0.53
VEGFA-205ENST00000372067 SSTR3P32745 418 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-205ENST00000372067 MFAP3P55082 362 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 ACTR2P61160 394 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms