RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 LACRTQ9GZZ8 138 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 FAM53CQ9NYF3 392 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 LARSQ9P2J5 1176 aaKnown RBP15.34■□□□□ 0.05
LDB3-204ENST00000372066 TRIM10Q9UDY6 481 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 JRKLQ9Y4A0 524 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 MYH10P35580 1976 aa15.34■□□□□ 0.05
LDB3-204ENST00000372066 ZNF263O14978 683 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 MAFGO15525 162 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 DHX15O43143 795 aaKnown RBP15.33■□□□□ 0.05
LDB3-204ENST00000372066 TGFB1I1O43294 461 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 AKAP3O75969 853 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 PLEKP08567 350 aaPredicted RBP15.33■□□□□ 0.05
LDB3-204ENST00000372066 CSF2RAP15509 400 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 PRLRP16471 622 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 MAGEA1P43355 309 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 QARSP47897 775 aaKnown RBP15.33■□□□□ 0.05
LDB3-204ENST00000372066 SNRPFP62306 86 aaKnown RBP15.33■□□□□ 0.05
LDB3-204ENST00000372066 RPS6P62753 249 aaKnown RBP15.33■□□□□ 0.05
LDB3-204ENST00000372066 PPP2R5AQ15172 486 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 ASIC2Q16515 512 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 EXOC3L4Q17RC7 722 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 MUM1L1Q5H9M0 696 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 TMEM240Q5SV17 173 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 ODR4Q5SWX8 454 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 RNF207Q6ZRF8 634 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 C16orf59Q7L2K0 433 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 FIZ1Q96SL8 496 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 AP5M1Q9H0R1 490 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 GBP3Q9H0R5 595 aa15.33■□□□□ 0.05
LDB3-204ENST00000372066 RCCD1A6NED2 376 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 DYNC1LI2O43237 492 aaPredicted RBP15.32■□□□□ 0.04
LDB3-204ENST00000372066 DKC1O60832 514 aaKnown RBP eCLIP15.32■□□□□ 0.04
LDB3-204ENST00000372066 PPP1R37O75864 691 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 ZRANB2O95218 330 aaKnown RBP eCLIP15.32■□□□□ 0.04
LDB3-204ENST00000372066 ACRP10323 421 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 NKX3-2P78367 333 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 MRPS9P82933 396 aaKnown RBP15.32■□□□□ 0.04
LDB3-204ENST00000372066 CYP27A1Q02318 531 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 CXCL17Q6UXB2 119 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 FAM126BQ8IXS8 530 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 C4orf19Q8IY42 314 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 FAM186BQ8IYM0 893 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 IL31RAQ8NI17 732 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 HNRNPLLQ8WVV9 542 aaKnown RBP15.32■□□□□ 0.04
LDB3-204ENST00000372066 SLC35C1Q96A29 364 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 TIFAQ96CG3 184 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 GPRASP2Q96D09 838 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 IWS1Q96ST2 819 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 PDCD2LQ9BRP1 358 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 STRA6Q9BX79 667 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 ST6GALNAC4Q9H4F1 302 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 ZNF576Q9H609 170 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 TMEM206Q9H813 350 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 NLRC4Q9NPP4 1024 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 PXMP2Q9NR77 195 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 DMAC2Q9NW81 257 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 RAB21Q9UL25 225 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 UNC80Q8N2C7 3258 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 WDR64B1ANS9 1081 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 ZEB2O60315 1214 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 HIP1RO75146 1068 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 ERLIN1O75477 346 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 STAM2O75886 525 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 MCM3P25205 808 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 CCND2P30279 289 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 NMT1P30419 496 aaKnown RBP15.32■□□□□ 0.04
LDB3-204ENST00000372066 MAPK7Q13164 816 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 RAPGEF1Q13905 1077 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 SLC18A3Q16572 532 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 KLHDC7AQ5VTJ3 777 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 PADI6Q6TGC4 694 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 NSMFQ6X4W1 530 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 ZNF365Q70YC5 407 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 TLK2Q86UE8 772 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 NLRX1Q86UT6 975 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 C12orf56Q8IXR9 622 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 BANK1Q8NDB2 785 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 BORCS6Q96GS4 357 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 RMDN3Q96TC7 470 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 SENP7Q9BQF6 1050 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 PARD6BQ9BYG5 372 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 ARFGAP3Q9NP61 516 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 PDGFCQ9NRA1 345 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 ANKEF1Q9NU02 776 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 WRAP73Q9P2S5 460 aaPredicted RBP15.32■□□□□ 0.04
LDB3-204ENST00000372066 PUF60Q9UHX1 559 aaKnown RBP15.32■□□□□ 0.04
LDB3-204ENST00000372066 GNEQ9Y223 722 aaKnown RBP15.32■□□□□ 0.04
LDB3-204ENST00000372066 FRMD4BQ9Y2L6 1034 aa15.32■□□□□ 0.04
LDB3-204ENST00000372066 PLXNA1Q9UIW2 1896 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 BTNL10A8MVZ5 291 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 GRXCR1A8MXD5 290 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 CABYRO75952 493 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 GFPT2O94808 682 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 ATP1A1P05023 1023 aaKnown RBP15.31■□□□□ 0.04
LDB3-204ENST00000372066 UCHL3P15374 230 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 SMPD1P17405 629 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 RFX1P22670 979 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 CYP2C18P33260 490 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 PRKCIP41743 596 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms