RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 PVALEFA0A1B0GWK0 134 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 TTLL13PA6NNM8 815 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 N4BP3O15049 544 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 NR1I2O75469 434 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 EDN1P05305 212 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 UBXN11Q5T124 520 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 NT5DC1Q5TFE4 455 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 ZNF720Q7Z2F6 126 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 GAS2L3Q86XJ1 694 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 ECHDC2Q86YB7 292 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 CRIPAKQ8N1N5 446 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 TIGD1Q96MW7 591 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 ELAC1Q9H777 363 aaKnown RBP17.5■□□□□ 0.39
PFDN4-201ENST00000371419 FAM105AQ9NUU6 356 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 TMEM161AQ9NX61 479 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 TBC1D7Q9P0N9 293 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 TBX20Q9UMR3 447 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 USP20Q9Y2K6 914 aa17.5■□□□□ 0.39
PFDN4-201ENST00000371419 TLL1O43897 1013 aa17.49■□□□□ 0.39
PFDN4-201ENST00000371419 ZNF623O75123 536 aa17.49■□□□□ 0.39
PFDN4-201ENST00000371419 EOMESO95936 686 aa17.49■□□□□ 0.39
PFDN4-201ENST00000371419 RABGGTBP53611 331 aa17.49■□□□□ 0.39
PFDN4-201ENST00000371419 GTF2BQ00403 316 aa17.49■□□□□ 0.39
PFDN4-201ENST00000371419 RAB30Q15771 203 aa17.49■□□□□ 0.39
PFDN4-201ENST00000371419 ATF7IP2Q5U623 682 aa17.49■□□□□ 0.39
PFDN4-201ENST00000371419 SLC27A1Q6PCB7 646 aa17.49■□□□□ 0.39
PFDN4-201ENST00000371419 RAD9AQ99638 391 aa17.49■□□□□ 0.39
PFDN4-201ENST00000371419 PDZD7Q9H5P4 517 aa17.49■□□□□ 0.39
PFDN4-201ENST00000371419 PCDHB2Q9Y5E7 798 aa17.49■□□□□ 0.39
PFDN4-201ENST00000371419 PCDHA11Q9Y5I1 949 aa17.49■□□□□ 0.39
PFDN4-201ENST00000371419 KINO60870 393 aaKnown RBP17.48■□□□□ 0.39
PFDN4-201ENST00000371419 ALCAMQ13740 583 aa17.48■□□□□ 0.39
PFDN4-201ENST00000371419 ZC2HC1CQ53FD0 456 aaPredicted RBP17.48■□□□□ 0.39
PFDN4-201ENST00000371419 CDR2LQ86X02 465 aaPredicted RBP17.48■□□□□ 0.39
PFDN4-201ENST00000371419 RNF169Q8NCN4 708 aa17.48■□□□□ 0.39
PFDN4-201ENST00000371419 HVCN1Q96D96 273 aa17.48■□□□□ 0.39
PFDN4-201ENST00000371419 YME1L1Q96TA2 773 aa17.48■□□□□ 0.39
PFDN4-201ENST00000371419 ACO2Q99798 780 aaKnown RBP17.48■□□□□ 0.39
PFDN4-201ENST00000371419 ADPGKQ9BRR6 497 aa17.48■□□□□ 0.39
PFDN4-201ENST00000371419 TARS2Q9BW92 718 aaKnown RBP17.48■□□□□ 0.39
PFDN4-201ENST00000371419 EIF2AQ9BY44 585 aaKnown RBP17.48■□□□□ 0.39
PFDN4-201ENST00000371419 PBX4Q9BYU1 374 aa17.48■□□□□ 0.39
PFDN4-201ENST00000371419 TRIM6Q9C030 488 aaPredicted RBP17.48■□□□□ 0.39
PFDN4-201ENST00000371419 MSRAQ9UJ68 235 aa17.48■□□□□ 0.39
PFDN4-201ENST00000371419 TNFSF13BQ9Y275 285 aa17.48■□□□□ 0.39
PFDN4-201ENST00000371419 INSL6Q9Y581 213 aa17.48■□□□□ 0.39
PFDN4-201ENST00000371419 PCDHB13Q9Y5F0 798 aa17.48■□□□□ 0.39
PFDN4-201ENST00000371419 SYCE3A1L190 88 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 PPP1R37O75864 691 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 DGKIO75912 1065 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 GCNT3O95395 438 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 NPTXRO95502 500 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 PRR29P0C7W0 189 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 PBX2P40425 430 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 HTRA4P83105 476 aaPredicted RBP17.47■□□□□ 0.39
PFDN4-201ENST00000371419 EHHADHQ08426 723 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 DPYDQ12882 1025 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 POSTNQ15063 836 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 FAM26FQ5R3K3 315 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 ZPBP2Q6X784 338 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 APBB1IPQ7Z5R6 666 aaPredicted RBP17.47■□□□□ 0.39
PFDN4-201ENST00000371419 ZNF598Q86UK7 904 aaKnown RBP17.47■□□□□ 0.39
PFDN4-201ENST00000371419 MAP4K3Q8IVH8 894 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 PGBD4Q96DM1 585 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 BICD1Q96G01 975 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 STRA6Q9BX79 667 aa17.47■□□□□ 0.39
PFDN4-201ENST00000371419 HOOK1Q9UJC3 728 aaKnown RBP17.47■□□□□ 0.39
PFDN4-201ENST00000371419 HOXA2O43364 376 aa17.46■□□□□ 0.39
PFDN4-201ENST00000371419 KLRC4O43908 158 aa17.46■□□□□ 0.39
PFDN4-201ENST00000371419 ATF7P17544 494 aaPredicted RBP17.46■□□□□ 0.39
PFDN4-201ENST00000371419 CASP5P51878 434 aa17.46■□□□□ 0.39
PFDN4-201ENST00000371419 EEF1DP3Q658K8 133 aa17.46■□□□□ 0.39
PFDN4-201ENST00000371419 STXBP4Q6ZWJ1 553 aa17.46■□□□□ 0.39
PFDN4-201ENST00000371419 MRPL10Q7Z7H8 261 aaKnown RBP17.46■□□□□ 0.39
PFDN4-201ENST00000371419 HPS3Q969F9 1004 aa17.46■□□□□ 0.39
PFDN4-201ENST00000371419 CCDC47Q96A33 483 aaKnown RBP17.46■□□□□ 0.39
PFDN4-201ENST00000371419 EXOC1Q9NV70 894 aa17.46■□□□□ 0.39
PFDN4-201ENST00000371419 IPPQ9Y573 584 aa17.46■□□□□ 0.39
PFDN4-201ENST00000371419 SOX1O00570 391 aaPredicted RBP17.45■□□□□ 0.38
PFDN4-201ENST00000371419 TOM1L1O75674 476 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 PIGRP01833 764 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 RPN1P04843 607 aaKnown RBP17.45■□□□□ 0.38
PFDN4-201ENST00000371419 MYBP10242 640 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 MYOGP15173 224 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 DNAJB2P25686 324 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 LIG4P49917 911 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 DCAF4L1Q3SXM0 396 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 KMT5BQ4FZB7 885 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 ELOA2Q8IYF1 753 aaPredicted RBP17.45■□□□□ 0.38
PFDN4-201ENST00000371419 HACE1Q8IYU2 909 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 SMG8Q8ND04 991 aaKnown RBP17.45■□□□□ 0.38
PFDN4-201ENST00000371419 ZNF689Q96CS4 500 aaPredicted RBP17.45■□□□□ 0.38
PFDN4-201ENST00000371419 ACCSQ96QU6 501 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 TCHPQ9BT92 498 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 FGFBP2Q9BYJ0 223 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 PTPRHQ9HD43 1115 aa17.45■□□□□ 0.38
PFDN4-201ENST00000371419 YBX2Q9Y2T7 364 aaKnown RBP17.45■□□□□ 0.38
PFDN4-201ENST00000371419 HNRNPDLO14979 420 aaKnown RBP17.44■□□□□ 0.38
PFDN4-201ENST00000371419 FGFR1P11362 822 aa17.44■□□□□ 0.38
PFDN4-201ENST00000371419 ITGA4P13612 1032 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms