RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 MUTP22033 750 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 GLRA2P23416 452 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 ARL2P36404 184 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 RAB27AP51159 221 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 ZXDAP98168 799 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 SPECC1Q5M775 1068 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 PLPP4Q5VZY2 271 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 EXOC8Q8IYI6 725 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 RNF149Q8NC42 400 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 TCP11Q8WWU5 503 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 CLIC6Q96NY7 704 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 FBXO2Q9UK22 296 aaPredicted RBP16.8■□□□□ 0.28
SS18L1-202ENST00000370848 DENND4AQ7Z401 1863 aa16.8■□□□□ 0.28
SS18L1-202ENST00000370848 GAS2O43903 313 aaKnown RBP16.79■□□□□ 0.28
SS18L1-202ENST00000370848 NHLH1Q02575 133 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 CAPSQ13938 189 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 SMC1AQ14683 1233 aaKnown RBP16.79■□□□□ 0.28
SS18L1-202ENST00000370848 USP49Q70CQ1 688 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 CABP7Q86V35 215 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 HELQQ8TDG4 1101 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 BSNDQ8WZ55 320 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 CASP10Q92851 521 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 FBXL18Q96ME1 805 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 ZBP1Q9H171 429 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 CSRNP2Q9H175 543 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 ENTPD7Q9NQZ7 604 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 AGPAT5Q9NUQ2 364 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 TFIP11Q9UBB9 837 aaKnown RBP16.79■□□□□ 0.28
SS18L1-202ENST00000370848 HCFC2Q9Y5Z7 792 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 STK24Q9Y6E0 443 aa16.79■□□□□ 0.28
SS18L1-202ENST00000370848 ZDBF2Q9HCK1 2354 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 CYP11B2P19099 503 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 PBX3P40426 434 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 BCAR1P56945 870 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 ITIH3Q06033 890 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 TMEM119Q4V9L6 283 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 HYIQ5T013 277 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 ASIC4Q96FT7 647 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 CHAMP1Q96JM3 812 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 RUSC1Q9BVN2 902 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 FAM105AQ9NUU6 356 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 STK39Q9UEW8 545 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 ZDHHC9Q9Y397 364 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 USP34Q70CQ2 3546 aa16.78■□□□□ 0.28
SS18L1-202ENST00000370848 TMEM221A6NGB7 291 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 M0R296 226 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 INPPL1O15357 1258 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 LONP1P36776 959 aaKnown RBP16.77■□□□□ 0.28
SS18L1-202ENST00000370848 NASPP49321 788 aaPredicted RBP16.77■□□□□ 0.28
SS18L1-202ENST00000370848 ALDH7A1P49419 539 aaKnown RBP16.77■□□□□ 0.28
SS18L1-202ENST00000370848 SIGLEC14Q08ET2 396 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 GIT2Q14161 759 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 KARSQ15046 597 aaKnown RBP16.77■□□□□ 0.28
SS18L1-202ENST00000370848 PCBP1Q15365 356 aaKnown RBP eCLIP16.77■□□□□ 0.28
SS18L1-202ENST00000370848 PTPN21Q16825 1174 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 CATSPER4Q7RTX7 472 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 TMC7Q7Z402 723 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 MRPL10Q7Z7H8 261 aaKnown RBP16.77■□□□□ 0.28
SS18L1-202ENST00000370848 DDX53Q86TM3 631 aaKnown RBP16.77■□□□□ 0.28
SS18L1-202ENST00000370848 MCPH1Q8NEM0 835 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 AK8Q96MA6 479 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 NECTIN4Q96NY8 510 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 ADAM7Q9H2U9 754 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 TBC1D13Q9NVG8 400 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 DAXXQ9UER7 740 aaPredicted RBP16.77■□□□□ 0.28
SS18L1-202ENST00000370848 DNM3Q9UQ16 869 aa16.77■□□□□ 0.28
SS18L1-202ENST00000370848 ASAP2O43150 1006 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 CLASP2O75122 1294 aaKnown RBP16.76■□□□□ 0.27
SS18L1-202ENST00000370848 OFD1O75665 1012 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 SSBP05455 408 aaKnown RBP eCLIP16.76■□□□□ 0.27
SS18L1-202ENST00000370848 CTSAP10619 480 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 PTENP60484 403 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 MXD4Q14582 209 aaPredicted RBP16.76■□□□□ 0.27
SS18L1-202ENST00000370848 SLC39A14Q15043 492 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 TPRNQ4KMQ1 711 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 SRGAP1Q7Z6B7 1085 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 TMEM173Q86WV6 379 aaPredicted RBP16.76■□□□□ 0.27
SS18L1-202ENST00000370848 IFNLR1Q8IU57 520 aaPredicted RBP16.76■□□□□ 0.27
SS18L1-202ENST00000370848 LINC00301Q8NCQ3 95 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 TMEM169Q96HH4 297 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 IGSF21Q96ID5 467 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 EPSTI1Q96J88 318 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 PRRX2Q99811 253 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 KIFC3Q9BVG8 833 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 NRDE2Q9H7Z3 1164 aa16.76■□□□□ 0.27
SS18L1-202ENST00000370848 PIN4Q9Y237 131 aaKnown RBP16.76■□□□□ 0.27
SS18L1-202ENST00000370848 SRPRBQ9Y5M8 271 aaKnown RBP16.76■□□□□ 0.27
SS18L1-202ENST00000370848 CNTNAP2Q9UHC6 1331 aa16.75■□□□□ 0.27
SS18L1-202ENST00000370848 LRRIQ4A6NIV6 560 aa16.75■□□□□ 0.27
SS18L1-202ENST00000370848 EFEMP2O95967 443 aa16.75■□□□□ 0.27
SS18L1-202ENST00000370848 GALTP07902 379 aa16.75■□□□□ 0.27
SS18L1-202ENST00000370848 PLCG1P19174 1290 aa16.75■□□□□ 0.27
SS18L1-202ENST00000370848 HOXA11P31270 313 aaPredicted RBP16.75■□□□□ 0.27
SS18L1-202ENST00000370848 UBA7P41226 1012 aa16.75■□□□□ 0.27
SS18L1-202ENST00000370848 MBTD1Q05BQ5 628 aa16.75■□□□□ 0.27
SS18L1-202ENST00000370848 POU5F1BQ06416 359 aa16.75■□□□□ 0.27
SS18L1-202ENST00000370848 STK38Q15208 465 aa16.75■□□□□ 0.27
SS18L1-202ENST00000370848 NOMO2Q5JPE7 1267 aa16.75■□□□□ 0.27
SS18L1-202ENST00000370848 TWF2Q6IBS0 349 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms