RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 A0A1B0GUA9 196 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 LRRC53A6NM62 1247 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 SHOX2O60902 331 aaPredicted RBP10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 CNMDO75829 334 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 SUPT20HL2P0C7V6 817 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 LSP1P33241 339 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 CYP2J2P51589 502 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 PEX3P56589 373 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 POLR2FP61218 127 aaKnown RBP10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 SNX1Q13596 522 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 SPA17Q15506 151 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 ODF2Q5BJF6 829 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 PDXDC1Q6P996 788 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 HAUS6Q7Z4H7 955 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 MICAL1Q8TDZ2 1067 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 KIFAP3Q92845 792 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 ST6GALNAC4Q9H4F1 302 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 NLRC4Q9NPP4 1024 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 LCTP09848 1927 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 UTRNP46939 3433 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 SOWAHBA6NEL2 793 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 UNCXA6NJT0 531 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 HGSO14964 777 aaPredicted RBP10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 ZNF862O60290 1169 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 SORBS3O60504 671 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 EXOC3O60645 756 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 AMPD2Q01433 879 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 KCTD2Q14681 263 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 EXOC3L4Q17RC7 722 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 CCDC181Q5TID7 509 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 SLC9A9Q8IVB4 645 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 FAM133AQ8N9E0 248 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 ZNF473Q8WTR7 871 aaKnown RBP10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 BAP1Q92560 729 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 LACRTQ9GZZ8 138 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 HAUS4Q9H6D7 363 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 DMAC2Q9NW81 257 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 RBPJLQ9UBG7 517 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 SEPT9Q9UHD8 586 aaPredicted RBP10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 PNMA3Q9UL41 463 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 WDR81Q562E7 1941 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 CCDC169A6NNP5 214 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 DGAT1O75907 488 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 PRKCEQ02156 737 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 DMP1Q13316 513 aaPredicted RBP10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 XKR3Q5GH77 459 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 WDR78Q5VTH9 848 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 SFMBT2Q5VUG0 894 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 CCDC60Q8IWA6 550 aaPredicted RBP10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 MCPH1Q8NEM0 835 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 SYN2Q92777 582 aaPredicted RBP10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 CCT8L2Q96SF2 557 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 IKZF4Q9H2S9 585 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 C17orf75Q9HAS0 396 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 GPRC5CQ9NQ84 441 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 MYO1AQ9UBC5 1043 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 EXOC7Q9UPT5 735 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 DOCK5Q9H7D0 1870 aa10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 MYH9P35579 1960 aaKnown RBP10.8□□□□□ -0.68
PRPF38B-203ENST00000370025 SLC16A4O15374 487 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 TGFB3P10600 412 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 EDNRBP24530 442 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 SNRPFP62306 86 aaKnown RBP10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 GTF2BQ00403 316 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 SP2Q02086 613 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 FSTL1Q12841 308 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 MYO1EQ12965 1108 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 MOGSQ13724 837 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 PREPLQ4J6C6 727 aaPredicted RBP10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 GPAT2Q6NUI2 795 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 PARP9Q8IXQ6 854 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 PARD3BQ8TEW8 1205 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 SLC35C1Q96A29 364 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 ZIM3Q96PE6 472 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 MMP19Q99542 508 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 MROH8Q9H579 483 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 PLCB1Q9NQ66 1216 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 ZNF302Q9NR11 478 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 OPA1O60313 960 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 NOL4O94818 638 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 MCM3P25205 808 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 TRAPPC11Q7Z392 1133 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 GTF3C2Q8WUA4 911 aaPredicted RBP10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 TCP11Q8WWU5 503 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 TXNRD2Q9NNW7 524 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 REXO2Q9Y3B8 237 aaKnown RBP10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 KRT86O43790 486 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 AKR1B10O60218 316 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 KRT13P13646 458 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 NCKAP1LP55160 1127 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 Q3C1V9 767 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 SLC9C1Q4G0N8 1177 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 MAP1SQ66K74 1059 aaPredicted RBP10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 CYB5D1Q6P9G0 228 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 MICALCLQ6ZW33 695 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 FMNL3Q8IVF7 1028 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 HVCN1Q96D96 273 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 BORCS6Q96GS4 357 aa10.79□□□□□ -0.68
PRPF38B-203ENST00000370025 KMT5AQ9NQR1 393 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms