RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 SEPT12Q8IYM1 358 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 TAB3Q8N5C8 712 aaPredicted RBP11.72□□□□□ -0.53
LRIF1-201ENST00000369763 CCDC197Q8NCU1 140 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 PLEKHO2Q8TD55 490 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 POLR3CQ9BUI4 534 aaPredicted RBP11.72□□□□□ -0.53
LRIF1-201ENST00000369763 ABCF3Q9NUQ8 709 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 KLHL11Q9NVR0 708 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 RASAL2Q9UJF2 1139 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 TPX2Q9ULW0 747 aaKnown RBP11.72□□□□□ -0.53
LRIF1-201ENST00000369763 CES2O00748 559 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 RASGRF2O14827 1237 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 TBX3O15119 743 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 RARAP10276 462 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 FAM102BQ5T8I3 360 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 AGBL2Q5U5Z8 902 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 SPATS2Q86XZ4 545 aaKnown RBP11.72□□□□□ -0.53
LRIF1-201ENST00000369763 IL31RAQ8NI17 732 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 ZNF564Q8TBZ8 553 aaPredicted RBP11.72□□□□□ -0.53
LRIF1-201ENST00000369763 NACC1Q96RE7 527 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 CRAMP1Q96RY5 1269 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 CEP89Q96ST8 783 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 FGFR1OP2Q9NVK5 253 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 GRHL1Q9NZI5 618 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 NENFQ9UMX5 172 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 STK38LQ9Y2H1 464 aa11.72□□□□□ -0.53
LRIF1-201ENST00000369763 A0A0A6YYK5 440 aaPredicted RBP11.71□□□□□ -0.53
LRIF1-201ENST00000369763 ECE2O60344 883 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 GH1P01241 217 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 MYCLP12524 364 aaPredicted RBP11.71□□□□□ -0.53
LRIF1-201ENST00000369763 CDC25CP30307 473 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 CHRNA5P30532 468 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 NF2P35240 595 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 SMTNP53814 917 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 GPC5P78333 572 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 SNCBQ16143 134 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 BMT2Q1RMZ1 405 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 MIER3Q7Z3K6 550 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 CCDC50Q8IVM0 306 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 ZSWIM1Q9BR11 485 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 SAMD15Q9P1V8 674 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 L3MBTL1Q9Y468 752 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 MAST2Q6P0Q8 1798 aa11.71□□□□□ -0.53
LRIF1-201ENST00000369763 PIAS1O75925 651 aa11.71□□□□□ -0.54
LRIF1-201ENST00000369763 MMP10P09238 476 aa11.71□□□□□ -0.54
LRIF1-201ENST00000369763 CHKAP35790 457 aa11.71□□□□□ -0.54
LRIF1-201ENST00000369763 MXI1P50539 228 aa11.71□□□□□ -0.54
LRIF1-201ENST00000369763 KYNUQ16719 465 aa11.71□□□□□ -0.54
LRIF1-201ENST00000369763 ERMARDQ5T6L9 678 aa11.71□□□□□ -0.54
LRIF1-201ENST00000369763 PASD1Q8IV76 773 aa11.71□□□□□ -0.54
LRIF1-201ENST00000369763 GIMAP7Q8NHV1 300 aa11.71□□□□□ -0.54
LRIF1-201ENST00000369763 NAP1L3Q99457 506 aaPredicted RBP11.71□□□□□ -0.54
LRIF1-201ENST00000369763 NCAPGQ9BPX3 1015 aa11.71□□□□□ -0.54
LRIF1-201ENST00000369763 MTRF1LQ9UGC7 380 aaKnown RBP11.71□□□□□ -0.54
LRIF1-201ENST00000369763 USTQ9Y2C2 406 aa11.71□□□□□ -0.54
LRIF1-201ENST00000369763 PHF2O75151 1096 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 CCDC172P0C7W6 258 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 HOXA10P31260 410 aaPredicted RBP11.7□□□□□ -0.54
LRIF1-201ENST00000369763 CETN1Q12798 172 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 CPA5Q8WXQ8 436 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 SEMA4DQ92854 862 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 MKL1Q969V6 931 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 ZDHHC15Q96MV8 337 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 FAM129AQ9BZQ8 928 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 HSPBP1Q9NZL4 362 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 TCEAL9Q9UHQ7 104 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 SBF2Q86WG5 1849 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 COL5A3P25940 1745 aaPredicted RBP11.7□□□□□ -0.54
LRIF1-201ENST00000369763 TCP11X1B4DZS4 312 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 O00370 1275 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 RASSF9O75901 435 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 GJB6O95452 261 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 EIF2AK2P19525 551 aaKnown RBP11.7□□□□□ -0.54
LRIF1-201ENST00000369763 CALCOCO2Q13137 446 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 NUGGCQ68CJ6 796 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 STXBP4Q6ZWJ1 553 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 FAM228AQ86W67 206 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 MYCBPQ99417 103 aaPredicted RBP11.7□□□□□ -0.54
LRIF1-201ENST00000369763 TACO1Q9BSH4 297 aaKnown RBP11.7□□□□□ -0.54
LRIF1-201ENST00000369763 ADAM7Q9H2U9 754 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 CHST7Q9NS84 486 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 NFIBO00712 420 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 ITGB5P18084 799 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 SGO2Q562F6 1265 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 CYP4F22Q6NT55 531 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 RNF207Q6ZRF8 634 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 ANKS4BQ8N8V4 417 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 TMEM117Q9H0C3 514 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 TRIM33Q9UPN9 1127 aa11.7□□□□□ -0.54
LRIF1-201ENST00000369763 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
LRIF1-201ENST00000369763 CENPFP49454 3210 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 ADAMTSL1Q8N6G6 1762 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 GSTTP1A0A1W2PQM5 241 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 GTPBP10A4D1E9 387 aaKnown RBP11.69□□□□□ -0.54
LRIF1-201ENST00000369763 CHUKO15111 745 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 RAD17O75943 681 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 ADRB2P07550 413 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 PDE6BP35913 854 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 PTGIRP43119 386 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 MOXD1Q6UVY6 613 aa11.69□□□□□ -0.54
LRIF1-201ENST00000369763 FAM47EQ6ZV65 393 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms