RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 CCDC166P0CW27 439 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 SFTPCP11686 197 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 CD9P21926 228 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 CCT8P50990 548 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 HDAC4P56524 1084 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 KCNC4Q03721 635 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 PPP2R3AQ06190 1150 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 TUBB2AQ13885 445 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 PDIA6Q15084 440 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 PROSER3Q2NL68 480 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 LRRFIP1Q32MZ4 808 aaKnown RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 SETMARQ53H47 684 aaPredicted RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 CEP85LQ5SZL2 805 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 RBM20Q5T481 1227 aaKnown RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 FAM102BQ5T8I3 360 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 PDE12Q6L8Q7 609 aaKnown RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 GPAT2Q6NUI2 795 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 SARM1Q6SZW1 724 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 HHIPL2Q6UWX4 724 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 CEP57Q86XR8 500 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 NRSN1Q8IZ57 195 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 UTP15Q8TED0 518 aaKnown RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 BAP1Q92560 729 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 MAML3Q96JK9 1138 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 TUBB2BQ9BVA1 445 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 SARGQ9BW04 601 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 TTYH1Q9H313 450 aaPredicted RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 BICC1Q9H694 974 aaKnown RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 VCPKMTQ9H867 229 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 CYP4F11Q9HBI6 524 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 PCDH18Q9HCL0 1135 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 FAM217BQ9NTX9 383 aaPredicted RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 STK39Q9UEW8 545 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 GJD2Q9UKL4 321 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 PCDHGB5Q9Y5G0 923 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 PCDHA11Q9Y5I1 949 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 MROH7-TTC4A0A0A0MT08 1334 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 PFASO15067 1338 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 CCDC162PA2VCL2 907 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 EYA2O00167 538 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 PMM2O15305 246 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 DGKIO75912 1065 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ATP5JP18859 108 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 GARTP22102 1010 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 XPAP23025 273 aaPredicted RBP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 RFC2P35250 354 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 HSD17B2P37059 387 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 RANBP1P43487 201 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 AARSP49588 968 aaKnown RBP eCLIP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 SLFN5Q08AF3 891 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 LEXMQ3ZCV2 418 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 CMPK2Q5EBM0 449 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 CWC27Q6UX04 472 aaKnown RBP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ANKRD33Q7Z3H0 272 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 LUZP1Q86V48 1076 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 HOMER1Q86YM7 354 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 SPATA2LQ8IUW3 424 aaPredicted RBP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 TRIML2Q8N7C3 387 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF280CQ8ND82 737 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 KLHDC4Q8TBB5 520 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 SPATA18Q8TC71 538 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 TEKT4Q8WW24 435 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ALKBH8Q96BT7 664 aaKnown RBP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 RHOBTB2Q9BYZ6 727 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 CYLDQ9NQC7 956 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 KLC4Q9NSK0 619 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 TMEM260Q9NX78 707 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 PDP2Q9P2J9 529 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 HECAQ9UBI9 543 aaPredicted RBP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 AGTPBP1Q9UPW5 1226 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ANGPTL3Q9Y5C1 460 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 MRFAP1Q9Y605 127 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 DLG5Q8TDM6 1919 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 A6NHS1 94 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 P4HA2O15460 535 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ZBTB43O43298 467 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 SNX4O95219 450 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 HOXA7P31268 230 aaPredicted RBP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 GSDMDP57764 484 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 DAB2P98082 770 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 USP4Q13107 963 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 VGLL4Q14135 290 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 SNCBQ16143 134 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 INAQ16352 499 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ERCC6LQ2NKX8 1250 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 BMP2KLQ5H9B9 411 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 USP17L2Q6R6M4 530 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF804AQ7Z570 1209 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ZFPM1Q8IX07 1006 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ABRAQ8N0Z2 381 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 GALNT6Q8NCL4 622 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 TRPC4APQ8TEL6 797 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 LEO1Q8WVC0 666 aaPredicted RBP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF606Q8WXB4 792 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 MAML1Q92585 1016 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 P3H4Q92791 437 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 CDCA7LQ96GN5 454 aa5.48□□□□□ -1.53
UBE3D-202ENST00000369746 NAF1Q96HR8 494 aaKnown RBP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 INTS4Q96HW7 963 aaKnown RBP5.48□□□□□ -1.53
UBE3D-202ENST00000369746 USP26Q9BXU7 913 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms