RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 XPO6Q96QU8 1125 aaKnown RBP17.17■□□□□ 0.34
SYNCRIP-202ENST00000369622 SLC12A4Q9UP95 1085 aa17.17■□□□□ 0.34
SYNCRIP-202ENST00000369622 C5orf60A6NFR6 353 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 TNFAIP3P21580 790 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 SESN3P58005 492 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 ZNF268Q14587 947 aaPredicted RBP17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 CRY2Q49AN0 593 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 APOBEC3HQ6NTF7 200 aaKnown RBP17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 RUFY4Q6ZNE9 571 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 NT5DC3Q86UY8 548 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 LNX1Q8TBB1 728 aaPredicted RBP17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 PHACTR1Q9C0D0 580 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 COA1Q9GZY4 146 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 RMI1Q9H9A7 625 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 SIX2Q9NPC8 291 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 PCDHGA4Q9Y5G9 962 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 DDX39AO00148 427 aaKnown RBP17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 LUC7L3O95232 432 aaKnown RBP17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 OATP04181 439 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 MMEP08473 750 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 PLTPP55058 493 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 CD302Q8IX05 232 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 SYCE1Q8N0S2 351 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 GLT8D2Q9H1C3 349 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 TAS2R14Q9NYV8 317 aa17.16■□□□□ 0.34
SYNCRIP-202ENST00000369622 CHN1P15882 459 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 HOXA7P31268 230 aaPredicted RBP17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 PSMC2P35998 433 aaKnown RBP17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 MTA1Q13330 715 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 RINT1Q6NUQ1 792 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 MGARPQ8TDB4 240 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 UCMAQ8WVF2 138 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 DYDC1Q8WWB3 177 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 DYDC2Q96IM9 177 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 WDR35Q9P2L0 1181 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 COL5A3P25940 1745 aaPredicted RBP17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 SMAPO00193 183 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 TGFB1I1O43294 461 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 ALDH3A1P30838 453 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 CRKP46108 304 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 DBN1Q16643 649 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 DPY19L2P1Q6NXN4 242 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 PCIF1Q9H4Z3 704 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 PREBQ9HCU5 417 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 SAMD15Q9P1V8 674 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 USP21Q9UK80 565 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 SNX24Q9Y343 169 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 PLIN4Q96Q06 1357 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 IGSF9BQ9UPX0 1349 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 RAD23BP54727 409 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 RIPK1Q13546 671 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 CBWD6Q4V339 395 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 CBWD3Q5JTY5 395 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 CBWD5Q5RIA9 395 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 HS2ST1Q7LGA3 356 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 PALB2Q86YC2 1186 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 CCDC17Q96LX7 622 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 THAP2Q9H0W7 228 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 MLXIPLQ9NP71 852 aa17.15■□□□□ 0.34
SYNCRIP-202ENST00000369622 CCDC188H7C350 402 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 EXOC3O60645 756 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 RARAP10276 462 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 SOX5P35711 763 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 AP3B2Q13367 1082 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 ODR4Q5SWX8 454 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 EMC10Q5UCC4 262 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 ZNF746Q6NUN9 644 aaPredicted RBP17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 CCDC174Q6PII3 467 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 FAM178BQ8IXR5 827 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 LENG9Q96B70 501 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 ARHGEF26Q96DR7 871 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 FMO2Q99518 471 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 SH2D3AQ9BRG2 576 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 FRMD4BQ9Y2L6 1034 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 MYH4Q9Y623 1939 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 NDUFB10O96000 172 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 ATP11AP98196 1134 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 SLMAPQ14BN4 828 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 VPS72Q15906 364 aa17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 ZYXQ15942 572 aaKnown RBP17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 EPM2AIP1Q7L775 607 aaPredicted RBP17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 PRMT1Q99873 361 aaKnown RBP17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 SUCLA2Q9P2R7 463 aaPredicted RBP17.14■□□□□ 0.33
SYNCRIP-202ENST00000369622 CYP3A7-CYP3A51PA0A087WV96 503 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 SETSIPP0DME0 302 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 CYP3A7P24462 503 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 PRKCIP41743 596 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 MSH2P43246 934 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 TRIM42Q8IWZ5 723 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 LMNTD2Q8IXW0 634 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 DDX23Q9BUQ8 820 aaKnown RBP17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 CTTNBP2NLQ9P2B4 639 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 F8VZ95 297 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 H0YGN5 161 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 FMO5P49326 533 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 LACTBP83111 547 aaPredicted RBP17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 DR1Q01658 176 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 LRRC14Q15048 493 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 MFSD4BQ5TF39 518 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 SYDE2Q5VT97 1194 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms