RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 RPUSD2Q8IZ73 545 aaKnown RBP19.6■□□□□ 0.73
LMNA-207ENST00000368301 PARD3BQ8TEW8 1205 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 SCFD2Q8WU76 684 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 EXOC4Q96A65 974 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 PCDHB18PQ96TA0 734 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 SPATA31C2B4DYI2 1134 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 MAPK13O15264 365 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 CCDC172P0C7W6 258 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 RFX1P22670 979 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 TNFRSF8P28908 595 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 EPHB4P54760 987 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 PPM1KQ8N3J5 372 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 ACTRT1Q8TDG2 376 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 KIFAP3Q92845 792 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 HES6Q96HZ4 224 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 FAM204AQ9H8W3 233 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 CYP26B1Q9NR63 512 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 EXOC7Q9UPT5 735 aa19.6■□□□□ 0.73
LMNA-207ENST00000368301 USP2O75604 605 aaPredicted RBP19.59■□□□□ 0.73
LMNA-207ENST00000368301 CHRNB2P17787 502 aa19.59■□□□□ 0.73
LMNA-207ENST00000368301 MTERF2Q49AM1 385 aa19.59■□□□□ 0.73
LMNA-207ENST00000368301 CYFIP1Q7L576 1253 aa19.59■□□□□ 0.73
LMNA-207ENST00000368301 NOP9Q86U38 636 aaKnown RBP19.59■□□□□ 0.73
LMNA-207ENST00000368301 IFT20Q8IY31 132 aa19.59■□□□□ 0.73
LMNA-207ENST00000368301 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.59■□□□□ 0.73
LMNA-207ENST00000368301 LMBR1Q8WVP7 490 aa19.59■□□□□ 0.73
LMNA-207ENST00000368301 SPIRE2Q8WWL2 714 aa19.59■□□□□ 0.73
LMNA-207ENST00000368301 NTPCRQ9BSD7 190 aaKnown RBP19.59■□□□□ 0.73
LMNA-207ENST00000368301 GOLGA6BA6NDN3 693 aa19.59■□□□□ 0.73
LMNA-207ENST00000368301 CYP26A1O43174 497 aa19.59■□□□□ 0.73
LMNA-207ENST00000368301 ATP4AP20648 1035 aa19.59■□□□□ 0.73
LMNA-207ENST00000368301 SNRPFP62306 86 aaKnown RBP19.59■□□□□ 0.73
LMNA-207ENST00000368301 DCAF12L1Q5VU92 463 aa19.59■□□□□ 0.73
LMNA-207ENST00000368301 TAS1R2Q8TE23 839 aa19.59■□□□□ 0.73
LMNA-207ENST00000368301 POMGNT1Q8WZA1 660 aa19.59■□□□□ 0.73
LMNA-207ENST00000368301 POLR3FQ9H1D9 316 aaPredicted RBP19.59■□□□□ 0.73
LMNA-207ENST00000368301 WDR90Q96KV7 1748 aa19.58■□□□□ 0.73
LMNA-207ENST00000368301 PGRMC1O00264 195 aaKnown RBP19.58■□□□□ 0.73
LMNA-207ENST00000368301 FTLP02792 175 aaPredicted RBP19.58■□□□□ 0.73
LMNA-207ENST00000368301 TNNC1P63316 161 aa19.58■□□□□ 0.73
LMNA-207ENST00000368301 VGLL4Q14135 290 aa19.58■□□□□ 0.73
LMNA-207ENST00000368301 SLC47A2Q86VL8 602 aa19.58■□□□□ 0.73
LMNA-207ENST00000368301 SYCE1Q8N0S2 351 aa19.58■□□□□ 0.73
LMNA-207ENST00000368301 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.58■□□□□ 0.735e-7■■□□□ 13.2
LMNA-207ENST00000368301 DDX47Q9H0S4 455 aaKnown RBP19.58■□□□□ 0.73
LMNA-207ENST00000368301 AMFRQ9UKV5 643 aa19.58■□□□□ 0.73
LMNA-207ENST00000368301 SNCAIPQ9Y6H5 919 aa19.58■□□□□ 0.73
LMNA-207ENST00000368301 NFASCO94856 1347 aa19.58■□□□□ 0.73
LMNA-207ENST00000368301 ANKRD62A6NC57 917 aa19.58■□□□□ 0.72
LMNA-207ENST00000368301 DDX3YO15523 660 aaKnown RBP19.58■□□□□ 0.72
LMNA-207ENST00000368301 CALCAP01258 141 aa19.58■□□□□ 0.72
LMNA-207ENST00000368301 NOL9Q5SY16 702 aaKnown RBP19.58■□□□□ 0.72
LMNA-207ENST00000368301 EMBQ6PCB8 327 aa19.58■□□□□ 0.72
LMNA-207ENST00000368301 SLC17A8Q8NDX2 589 aa19.58■□□□□ 0.72
LMNA-207ENST00000368301 EPS8L1Q8TE68 723 aa19.58■□□□□ 0.72
LMNA-207ENST00000368301 HOXC10Q9NYD6 342 aa19.58■□□□□ 0.72
LMNA-207ENST00000368301 NOCTQ9UK39 431 aaKnown RBP19.58■□□□□ 0.72
LMNA-207ENST00000368301 DAAM1Q9Y4D1 1078 aa19.58■□□□□ 0.72
LMNA-207ENST00000368301 HNRNPDLO14979 420 aaKnown RBP19.57■□□□□ 0.72
LMNA-207ENST00000368301 DLATP10515 647 aaKnown RBP19.57■□□□□ 0.72
LMNA-207ENST00000368301 GUCY2FP51841 1108 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 ERVK-9P63128 1117 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 SEPT14Q6ZU15 432 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 FAM71AQ8IYT1 594 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 DHX38Q92620 1227 aaKnown RBP19.57■□□□□ 0.72
LMNA-207ENST00000368301 CAVIN3Q969G5 261 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 HVCN1Q96D96 273 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 NR2E1Q9Y466 385 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 MYH9P35579 1960 aaKnown RBP19.57■□□□□ 0.72
LMNA-207ENST00000368301 ATMINO43313 823 aaPredicted RBP19.57■□□□□ 0.72
LMNA-207ENST00000368301 DGAT1O75907 488 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 SUPT20HL2P0C7V6 817 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 CYP24A1Q07973 514 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 SUPT20HL1Q3ZLR7 823 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 KRT39Q6A163 491 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 RASGEF1CQ8N431 466 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 HELQQ8TDG4 1101 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 TMEM143Q96AN5 459 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 MFSD14AQ96MC6 490 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 FBXL18Q96ME1 805 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 PI4K2AQ9BTU6 479 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 R3HDMLQ9H3Y0 253 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 BTBD7Q9P203 1132 aa19.57■□□□□ 0.72
LMNA-207ENST00000368301 WNT7BP56706 349 aa19.56■□□□□ 0.72
LMNA-207ENST00000368301 MCCD1P59942 119 aaPredicted RBP19.56■□□□□ 0.72
LMNA-207ENST00000368301 GNPTABQ3T906 1256 aa19.56■□□□□ 0.72
LMNA-207ENST00000368301 LMBRD2Q68DH5 695 aaPredicted RBP19.56■□□□□ 0.72
LMNA-207ENST00000368301 TATDN2Q93075 761 aa19.56■□□□□ 0.72
LMNA-207ENST00000368301 FAM213AQ9BRX8 229 aa19.56■□□□□ 0.72
LMNA-207ENST00000368301 ATP6V0A4Q9HBG4 840 aa19.56■□□□□ 0.72
LMNA-207ENST00000368301 TMEM8AQ9HCN3 771 aa19.56■□□□□ 0.72
LMNA-207ENST00000368301 KRIT1O00522 736 aa19.56■□□□□ 0.72
LMNA-207ENST00000368301 PMM2O15305 246 aa19.56■□□□□ 0.72
LMNA-207ENST00000368301 MMEP08473 750 aa19.56■□□□□ 0.72
LMNA-207ENST00000368301 PRPF4BQ13523 1007 aaKnown RBP19.56■□□□□ 0.72
LMNA-207ENST00000368301 NAA35Q5VZE5 725 aa19.56■□□□□ 0.72
LMNA-207ENST00000368301 MIS18BP1Q6P0N0 1132 aa19.56■□□□□ 0.72
LMNA-207ENST00000368301 SV2AQ7L0J3 742 aa19.56■□□□□ 0.72
LMNA-207ENST00000368301 DDX42Q86XP3 938 aaKnown RBP eCLIP19.56■□□□□ 0.72
LMNA-207ENST00000368301 FMNL3Q8IVF7 1028 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms