RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 STAT4Q14765 748 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 CATSPEREQ5SY80 951 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 KRTAP5-11Q6L8G4 156 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 MFSD5Q6N075 450 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 TIGD7Q6NT04 549 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 FKBP9P1Q75LS8 142 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 CPT1CQ8TCG5 803 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 NELL1Q92832 810 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 C16orf92Q96LL3 132 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 ELF4Q99607 663 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 PRDM13Q9H4Q3 707 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 IFT22Q9H7X7 185 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 SPTLC3Q9NUV7 552 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 SORCS3Q9UPU3 1222 aa4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 RBM8AQ9Y5S9 174 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-201ENST00000368287 GRXCR1A8MXD5 290 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 MAFGO15525 162 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 TGM5O43548 720 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 BRINP1O60477 761 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 RAB11FIP3O75154 756 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 IPO13O94829 963 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 CD40P25942 277 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 LSP1P33241 339 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 ROM1Q03395 351 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 EPHA7Q15375 998 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 ATP13A4Q4VNC1 1196 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 TTC38Q5R3I4 469 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 C1QL3Q5VWW1 255 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 Q6YL49 198 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 ATL2Q8NHH9 583 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 COG1Q8WTW3 980 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 FAM193BQ96PV7 902 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 TUBGCP5Q96RT8 1024 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 MS4A5Q9H3V2 200 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 VTA1Q9NP79 307 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 IL23AQ9NPF7 189 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 DDX56Q9NY93 547 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 KCNG1Q9UIX4 513 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 INSL6Q9Y581 213 aa4.78□□□□□ -1.64
ECHDC1-201ENST00000368287 UBA6A0AVT1 1052 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 LCHNA4D1U4 455 aa4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 RASSF10A6NK89 507 aa4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 GPR39O43194 453 aa4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 KATNA1O75449 491 aa4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 HSP90B1P14625 803 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 LAG3P18627 525 aa4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 PTX3P26022 381 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 APEX1P27695 318 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 TMPRSS15P98073 1019 aa4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 LRRC32Q14392 662 aa4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 SP5Q6BEB4 398 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 PHYKPLQ8IUZ5 450 aa4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 BCL6BQ8N143 479 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 GFM2Q969S9 779 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 FOXB1Q99853 325 aa4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 TESQ9UGI8 421 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 RCAN3Q9UKA8 241 aa4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 PHLDB1Q86UU1 1377 aa4.77□□□□□ -1.65
ECHDC1-201ENST00000368287 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 ULK1O75385 1050 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 RECQL4O94761 1208 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 ADAM8P78325 824 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 SLC6A3Q01959 620 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 ALDH6A1Q02252 535 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 FAPQ12884 760 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 TCIRG1Q13488 830 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 DDB1Q16531 1140 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 BRDTQ58F21 947 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 LCE1AQ5T7P2 110 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 GPR158Q5T848 1215 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 C7orf31Q8N865 590 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 MDGA1Q8NFP4 955 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 WDR66Q8TBY9 1149 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 RPGRQ92834 1020 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 ARL8AQ96BM9 186 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 MAML3Q96JK9 1138 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 CCDC8Q9H0W5 538 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 EMC7Q9NPA0 242 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 MCM8Q9UJA3 840 aa4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 APOBEC2Q9Y235 224 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 NOC2LQ9Y3T9 749 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-201ENST00000368287 CENPVL1A0A0U1RR11 272 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 C2orf78A6NCI8 922 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 MYADML2A6NDP7 307 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 MAFO75444 373 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 PRKD3O94806 890 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 SCAF4O95104 1147 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 APOL3O95236 402 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 C1RP00736 705 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 PDGFRBP09619 1106 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 ZEB1P37275 1124 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 GUCY2FP51841 1108 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 PHC1P78364 1004 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 MTMR1Q13613 665 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 ERCC6LQ2NKX8 1250 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 PLEKHG6Q3KR16 790 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 GAGE13Q4V321 117 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 PRAMEF9Q5VWM5 478 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 NAIF1Q69YI7 327 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 SLFN12LQ6IEE8 588 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms