RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CYP1A2P05177 515 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 ASNSP08243 561 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 ALAS1P13196 640 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 GCLMP48507 274 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 PEX5P50542 639 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 PMS2P54278 862 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 ZNF211Q13398 564 aaPredicted RBP15.39■□□□□ 0.05
CD48-201ENST00000368045 PLCB4Q15147 1175 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 CYP1B1Q16678 543 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 MMS22LQ6ZRQ5 1243 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 OGFOD1Q8N543 542 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 MTMR14Q8NCE2 650 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 EPS8L1Q8TE68 723 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 CLEC4DQ8WXI8 215 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 SHC3Q92529 594 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 CYFIP2Q96F07 1278 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 PGM2Q96G03 612 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 TMEM117Q9H0C3 514 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 ERVK-5Q9HDB9 667 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 ANKEF1Q9NU02 776 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 FBXO28Q9NVF7 368 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 BCCIPQ9P287 314 aaKnown RBP eCLIP15.39■□□□□ 0.05
CD48-201ENST00000368045 UVRAGQ9P2Y5 699 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 MTRF1LQ9UGC7 380 aaKnown RBP15.39■□□□□ 0.05
CD48-201ENST00000368045 CNOT7Q9UIV1 285 aaKnown RBP15.39■□□□□ 0.05
CD48-201ENST00000368045 ATP8A1Q9Y2Q0 1164 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 C5orf60A6NFR6 353 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 CCDC169A6NNP5 214 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 DDX39AO00148 427 aaKnown RBP15.39■□□□□ 0.05
CD48-201ENST00000368045 CHRNB2P17787 502 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 GTF2H1P32780 548 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 JAK3P52333 1124 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 SEC24CP53992 1094 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 MAGOHP61326 146 aaKnown RBP15.39■□□□□ 0.05
CD48-201ENST00000368045 MAP3K10Q02779 954 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 RASA3Q14644 834 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 DENND2CQ68D51 928 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 C6orf89Q6UWU4 347 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 SUGP1Q8IWZ8 645 aaKnown RBP15.39■□□□□ 0.05
CD48-201ENST00000368045 CNPY4Q8N129 248 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 PRELID2Q8N945 189 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 PRPF38AQ8NAV1 312 aaKnown RBP15.39■□□□□ 0.05
CD48-201ENST00000368045 CD101Q93033 1021 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 MAGOHBQ96A72 148 aaKnown RBP15.39■□□□□ 0.05
CD48-201ENST00000368045 TMEM109Q9BVC6 243 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 TRIM31Q9BZY9 425 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 TMOD4Q9NZQ9 345 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 GTF3C4Q9UKN8 822 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 COQ4Q9Y3A0 265 aa15.39■□□□□ 0.05
CD48-201ENST00000368045 APBA3O96018 575 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 COMTP21964 271 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 CHRNA5P30532 468 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 YWHABP31946 246 aaKnown RBP15.38■□□□□ 0.05
CD48-201ENST00000368045 SFNP31947 248 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 USP8P40818 1118 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 FNTAP49354 379 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 ZYXQ15942 572 aaKnown RBP15.38■□□□□ 0.05
CD48-201ENST00000368045 ZDHHC24Q6UX98 284 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 USP37Q86T82 979 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 RDM1Q8NG50 284 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 TMC2Q8TDI7 906 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 BBXQ8WY36 941 aaPredicted RBP15.38■□□□□ 0.05
CD48-201ENST00000368045 GLG1Q92896 1179 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 AGBL1Q96MI9 1066 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 TAOK3Q9H2K8 898 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 PPANQ9NQ55 473 aaKnown RBP15.38■□□□□ 0.05
CD48-201ENST00000368045 COL20A1Q9P218 1284 aa15.38■□□□□ 0.05
CD48-201ENST00000368045 WDR46O15213 610 aaKnown RBP15.37■□□□□ 0.05
CD48-201ENST00000368045 SGPL1O95470 568 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 HSPA1LP34931 641 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 GPC3P51654 580 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 PSMC5P62195 406 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 MTMR1Q13613 665 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 SLMAPQ14BN4 828 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 KRT39Q6A163 491 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 NOP9Q86U38 636 aaKnown RBP15.37■□□□□ 0.05
CD48-201ENST00000368045 C12orf50Q8NA57 414 aaPredicted RBP15.37■□□□□ 0.05
CD48-201ENST00000368045 IL31RAQ8NI17 732 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 PLEKHO2Q8TD55 490 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 LPAR1Q92633 364 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 KRT35Q92764 455 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 P3H4Q92791 437 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 FAM81BQ96LP2 452 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 PCDHB18PQ96TA0 734 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 STMN4Q9H169 189 aaPredicted RBP15.37■□□□□ 0.05
CD48-201ENST00000368045 EPB41L4BQ9H329 900 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 TMEM8AQ9HCN3 771 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 GRHL1Q9NZI5 618 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 PCDHA3Q9Y5H8 950 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 PSME4Q14997 1843 aa15.37■□□□□ 0.05
CD48-201ENST00000368045 ASTN2O75129 1339 aaPredicted RBP15.37■□□□□ 0.05
CD48-201ENST00000368045 WDR64B1ANS9 1081 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 TISP43B9A030 160 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 NFIBO00712 420 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 SMTNP53814 917 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 PLTPP55058 493 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 KRT76Q01546 638 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 MESDQ14696 234 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 CYFIP1Q7L576 1253 aa15.36■□□□□ 0.05
CD48-201ENST00000368045 MAEAQ7L5Y9 396 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms