RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 RALYLQ86SE5 291 aaKnown RBP16.55■□□□□ 0.24
VAMP4-202ENST00000367740 FGF13Q92913 245 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 FAM167AQ96KS9 214 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 NELL2Q99435 816 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 KXD1Q9BQD3 176 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 GCOM2Q9BZD3 368 aaPredicted RBP16.55■□□□□ 0.24
VAMP4-202ENST00000367740 LOC400499M0QZD8 3231 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 SMG1Q96Q15 3661 aaKnown RBP16.54■□□□□ 0.24
VAMP4-202ENST00000367740 ITPR1Q14643 2758 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 F8W810 466 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 TM4SF5O14894 197 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 ZNF862O60290 1169 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 ZMYND10O75800 440 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 PSAPP07602 524 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 GNAQP50148 359 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 LILRA6Q6PI73 481 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 UNQ6494/PRO21346Q6UXR6 183 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 PLA2G4DQ86XP0 818 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 GLYCTKQ8IVS8 523 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 SMAP1Q8IYB5 467 aaPredicted RBP16.54■□□□□ 0.24
VAMP4-202ENST00000367740 ZNF687Q8N1G0 1237 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 PGBD4Q96DM1 585 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 FAM193BQ96PV7 902 aaPredicted RBP16.54■□□□□ 0.24
VAMP4-202ENST00000367740 PHF20Q9BVI0 1012 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 LNPKQ9C0E8 428 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 RSAD1Q9HA92 442 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 DMXL2Q8TDJ6 3036 aa16.54■□□□□ 0.24
VAMP4-202ENST00000367740 A0A087WZ62 844 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 E7EWF7 191 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 HIP1O00291 1037 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 POMCP01189 267 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 OATP04181 439 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 RXRAP19793 462 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 ADCY1Q08828 1119 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 WWC2Q6AWC2 1192 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 ZNF852Q6ZMS4 543 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 MB21D2Q8IYB1 491 aaPredicted RBP16.53■□□□□ 0.24
VAMP4-202ENST00000367740 NCOA7Q8NI08 942 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 MAP4K1Q92918 833 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 B3GALT6Q96L58 329 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 FDXACB1Q9BRP7 624 aaPredicted RBP16.53■□□□□ 0.24
VAMP4-202ENST00000367740 CHRDQ9H2X0 955 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 RIC8AQ9NPQ8 531 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 HEBP1Q9NRV9 189 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 CHST7Q9NS84 486 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 PCDHB2Q9Y5E7 798 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 PCDHA10Q9Y5I2 948 aa16.53■□□□□ 0.24
VAMP4-202ENST00000367740 SOBPA7XYQ1 873 aa16.52■□□□□ 0.24
VAMP4-202ENST00000367740 FOSP01100 380 aaPredicted RBP16.52■□□□□ 0.24
VAMP4-202ENST00000367740 ZNF76P36508 570 aa16.52■□□□□ 0.24
VAMP4-202ENST00000367740 LIMK1P53667 647 aa16.52■□□□□ 0.24
VAMP4-202ENST00000367740 PRKCEQ02156 737 aa16.52■□□□□ 0.24
VAMP4-202ENST00000367740 SIM2Q14190 667 aaPredicted RBP16.52■□□□□ 0.24
VAMP4-202ENST00000367740 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.52■□□□□ 0.24
VAMP4-202ENST00000367740 COLGALT2Q8IYK4 626 aa16.52■□□□□ 0.24
VAMP4-202ENST00000367740 ITFG1Q8TB96 612 aa16.52■□□□□ 0.24
VAMP4-202ENST00000367740 MBOAT7Q96N66 472 aa16.52■□□□□ 0.24
VAMP4-202ENST00000367740 ZNF577Q9BSK1 485 aa16.52■□□□□ 0.24
VAMP4-202ENST00000367740 KANSL3Q9P2N6 904 aa16.52■□□□□ 0.24
VAMP4-202ENST00000367740 CNTNAP2Q9UHC6 1331 aa16.51■□□□□ 0.23
VAMP4-202ENST00000367740 TICRRQ7Z2Z1 1910 aa16.51■□□□□ 0.23
VAMP4-202ENST00000367740 FOXD2O60548 495 aaPredicted RBP16.51■□□□□ 0.23
VAMP4-202ENST00000367740 OR1G1P47890 313 aa16.51■□□□□ 0.23
VAMP4-202ENST00000367740 UGCGQ16739 394 aa16.51■□□□□ 0.23
VAMP4-202ENST00000367740 MAMSTRQ6ZN01 415 aa16.51■□□□□ 0.23
VAMP4-202ENST00000367740 MRPL10Q7Z7H8 261 aaKnown RBP16.51■□□□□ 0.23
VAMP4-202ENST00000367740 CCDC82Q8N4S0 544 aa16.51■□□□□ 0.23
VAMP4-202ENST00000367740 KDF1Q8NAX2 398 aaPredicted RBP16.51■□□□□ 0.23
VAMP4-202ENST00000367740 TBC1D22BQ9NU19 505 aa16.51■□□□□ 0.23
VAMP4-202ENST00000367740 FNIP2Q9P278 1114 aa16.51■□□□□ 0.23
VAMP4-202ENST00000367740 FBXW11Q9UKB1 542 aa16.51■□□□□ 0.23
VAMP4-202ENST00000367740 MRPS17Q9Y2R5 130 aaKnown RBP16.51■□□□□ 0.23
VAMP4-202ENST00000367740 F5P12259 2224 aa16.51■□□□□ 0.23
VAMP4-202ENST00000367740 HRO43593 1189 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 RPL17P18621 184 aaKnown RBP16.5■□□□□ 0.23
VAMP4-202ENST00000367740 CLK2P49760 499 aaKnown RBP16.5■□□□□ 0.23
VAMP4-202ENST00000367740 NAPAP54920 295 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 SRSF5Q13243 272 aaKnown RBP16.5■□□□□ 0.23
VAMP4-202ENST00000367740 AP3B2Q13367 1082 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 PPP2R5DQ14738 602 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 TARBP2Q15633 366 aaKnown RBP16.5■□□□□ 0.23
VAMP4-202ENST00000367740 TMTC3Q6ZXV5 915 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 CATSPER4Q7RTX7 472 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 TEX2Q8IWB9 1127 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 NPAS3Q8IXF0 933 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 CRYGNQ8WXF5 182 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.5■□□□□ 0.23
VAMP4-202ENST00000367740 AGPAT5Q9NUQ2 364 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 TCEAL9Q9UHQ7 104 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 NDRG2Q9UN36 371 aaKnown RBP16.5■□□□□ 0.23
VAMP4-202ENST00000367740 SAMM50Q9Y512 469 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 LAMA5O15230 3695 aa16.5■□□□□ 0.23
VAMP4-202ENST00000367740 CCR3P51677 355 aa16.49■□□□□ 0.23
VAMP4-202ENST00000367740 ADCY7P51828 1080 aa16.49■□□□□ 0.23
VAMP4-202ENST00000367740 CDC42EP1Q00587 391 aa16.49■□□□□ 0.23
VAMP4-202ENST00000367740 DSC1Q08554 894 aa16.49■□□□□ 0.23
VAMP4-202ENST00000367740 AASDHQ4L235 1098 aaPredicted RBP16.49■□□□□ 0.23
VAMP4-202ENST00000367740 PPP1R18Q6NYC8 613 aa16.49■□□□□ 0.23
VAMP4-202ENST00000367740 ZNF410Q86VK4 478 aa16.49■□□□□ 0.23
VAMP4-202ENST00000367740 RAB11FIP4Q86YS3 637 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms