RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 F5H6K3 240 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 GCLMP48507 274 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 KLRC3Q07444 240 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 PDCLQ13371 301 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 PIGHQ14442 188 aaPredicted RBP12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 MORF4L2Q15014 288 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 OR6B2Q6IFH4 312 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 NYAP1Q6ZVC0 841 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 UHMK1Q8TAS1 419 aaKnown RBP12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 ZNF302Q9NR11 478 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 SMYD2Q9NRG4 433 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 MYH11P35749 1972 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 NBPF26B4DH59 902 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 USP17L10C9JJH3 530 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 COBLO75128 1261 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 HNRNPH2P55795 449 aaKnown RBP12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 NBPF15Q8N660 670 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 ACAD9Q9H845 621 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 CLRN2A0PK11 232 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 KIF28PB7ZC32 967 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 PRLRP16471 622 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 ITIH2P19823 946 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 STRIP1Q5VSL9 837 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 FRMD8P1Q9BZ68 369 aaPredicted RBP12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 L2HGDHQ9H9P8 463 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 HDLBPQ00341 1268 aaKnown RBP12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 RPAINQ86UA6 219 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 AXIN2Q9Y2T1 843 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 DYNLT1P63172 113 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 APLFQ8IW19 511 aaPredicted RBP12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 KRT35Q92764 455 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 ZNF560Q96MR9 790 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 ZBTB18Q99592 522 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 INTS2Q9H0H0 1204 aaKnown RBP12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 CARD9Q9H257 536 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 PIK3R2O00459 728 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 HUS1O60921 280 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 PHF2O75151 1096 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 SPOUT1Q5T280 376 aaKnown RBP12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 PPP1R37O75864 691 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 HSPA4LO95757 839 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 GPC3P51654 580 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 THEM5Q8N1Q8 247 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 BFARQ9NZS9 450 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 COPS2P61201 443 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 FAM133BQ5BKY9 247 aaKnown RBP12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 NYAP2Q9P242 653 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 MROH1Q8NDA8 1641 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 IFT172Q9UG01 1749 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 GAS2O43903 313 aaKnown RBP12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 FMO5P49326 533 aa12.78□□□□□ -0.36
CDC42BPA-203ENST00000366766 MYH7P12883 1935 aa12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 PDE4DIPQ5VU43 2346 aa12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 KIF1CO43896 1103 aaKnown RBP12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 ROR1Q01973 937 aa12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 ZNF568Q3ZCX4 644 aa12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 LRRC31Q6UY01 552 aa12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 DDX5P17844 614 aaKnown RBP12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 XPAP23025 273 aaPredicted RBP12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 HEATR6Q6AI08 1181 aaKnown RBP12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 SUCLA2Q9P2R7 463 aaPredicted RBP12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 MYH15Q9Y2K3 1946 aa12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 CD58P19256 250 aa12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 PHEXP78562 749 aa12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 SESTD1Q86VW0 696 aa12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 GDAP1Q8TB36 358 aa12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 ATP6V1E2Q96A05 226 aa12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 ACAP3Q96P50 834 aa12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 MOV10L1Q9BXT6 1211 aaKnown RBP12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 MAP3K20Q9NYL2 800 aaKnown RBP12.77□□□□□ -0.36
CDC42BPA-203ENST00000366766 SAT1P21673 171 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 UGP2Q16851 508 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 NLRP4Q96MN2 994 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 MYO10Q9HD67 2058 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 GPS1Q13098 491 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 WDR93Q6P2C0 686 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 ENGASEQ8NFI3 743 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 FSD1LQ9BXM9 530 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 NGRNQ9NPE2 291 aaKnown RBP12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 ARL2BPQ9Y2Y0 163 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 SNX24Q9Y343 169 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 FLT1P17948 1338 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 BEND6Q5SZJ8 279 aaPredicted RBP12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 MMGT1Q8N4V1 131 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 WWP1Q9H0M0 922 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 ECE2O60344 883 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 ENTPD3O75355 529 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 SRBD1Q8N5C6 995 aaKnown RBP12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 TTC8Q8TAM2 541 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 BATF3Q9NR55 127 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 EMSYQ7Z589 1322 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 IGSF9BQ9UPX0 1349 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 EIF3HO15372 352 aaKnown RBP eCLIP12.77□□□□□ -0.372e-11■■■□□ 15.4
CDC42BPA-203ENST00000366766 HAUS6Q7Z4H7 955 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 RNF169Q8NCN4 708 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 N4BP2L2Q92802 583 aaPredicted RBP12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 AGPAT1Q99943 283 aa12.77□□□□□ -0.37
CDC42BPA-203ENST00000366766 KRT16P08779 473 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms