RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 ALG1L2C9J202 215 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 C1QTNF3-AMACRE9PGA6 284 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 FZD9O00144 591 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 PLSCR1O15162 318 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 HOXA3O43365 443 aaPredicted RBP4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 AKR1B10O60218 316 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 PCDHGA12O60330 932 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 ITGA10O75578 1167 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 MYBL2P10244 700 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 INSRRP14616 1297 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 AGXTP21549 392 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 ADSLP30566 484 aaPredicted RBP4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 HIBADHP31937 336 aaKnown RBP4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 HHEXQ03014 270 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 PPP3CAQ08209 521 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 ELAVL1Q15717 326 aaKnown RBP4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 CLUL1Q15846 466 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 MBNL2Q5VZF2 373 aaKnown RBP4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 Q6ZVL8 140 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 SPRED1Q7Z699 444 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 AMOTL1Q8IY63 956 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 FATE1Q969F0 183 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 CDK5RAP1Q96SZ6 601 aaKnown RBP4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 BRINP2Q9C0B6 783 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 NOP58Q9Y2X3 529 aaKnown RBP4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 TESMINQ9Y4I5 508 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 PCDHGA9Q9Y5G4 932 aaKnown RBP4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 PCDHGA8Q9Y5G5 932 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 PCDHGA7Q9Y5G6 932 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 PCDHGA6Q9Y5G7 932 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 PCDHGA3Q9Y5H0 932 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 PCDHGA2Q9Y5H1 932 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 RPTORQ8N122 1335 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 ZMYM3Q14202 1370 aa4.37□□□□□ -1.71
RNU4-48P-201ENST00000365559 ADCY6O43306 1168 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 GYPEP15421 78 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 GZMKP49863 264 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 SLC5A3P53794 718 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 MALLQ13021 153 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 MRPL49Q13405 166 aaKnown RBP4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 PCBP2Q15366 365 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 MST1LQ2TV78 715 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 ANO4Q32M45 955 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 BRDTQ58F21 947 aaPredicted RBP4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 MUM1L1Q5H9M0 696 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 Q6ZRM9 215 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 GPR156Q8NFN8 814 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 SH3RF3Q8TEJ3 882 aaPredicted RBP4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 JADE3Q92613 823 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 HOXB13Q92826 284 aaPredicted RBP4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 EXTL1Q92935 676 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 MIEF2Q96C03 454 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 IL17RAQ96F46 866 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 BORCS6Q96GS4 357 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 FAXDC2Q96IV6 333 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 PAWRQ96IZ0 340 aaKnown RBP4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 ASPSCR1Q9BZE9 553 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 GREM2Q9H772 168 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 MKS1Q9NXB0 559 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 GPRC5DQ9NZD1 345 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 TNKSO95271 1327 aa4.36□□□□□ -1.71
RNU4-48P-201ENST00000365559 WNT10BO00744 389 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 RBP3P10745 1247 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 IBSPP21815 317 aaPredicted RBP4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 ACRV1P26436 265 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 MCAMP43121 646 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 SCNN1GP51170 649 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 ACAP2Q15057 778 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 PRAMEF14Q5SWL7 426 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 C1QL3Q5VWW1 255 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 MFSD5Q6N075 450 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 GGNQ86UU5 652 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 XYLT1Q86Y38 959 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 ANKRD35Q8N283 1001 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 PPM1NQ8N819 430 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 MB21D1Q8N884 522 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 REPS2Q8NFH8 660 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 MDM1Q8TC05 714 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 ZNF480Q8WV37 535 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 CEP95Q96GE4 821 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 FUBP3Q96I24 572 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 SMAD5Q99717 465 aaKnown RBP4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 LSM14BQ9BX40 385 aaKnown RBP4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 CPEB1Q9BZB8 566 aaKnown RBP4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 EPC1Q9H2F5 836 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 HOMER2Q9NSB8 354 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 RBM12Q9NTZ6 932 aaKnown RBP4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 TRPS1Q9UHF7 1281 aa4.35□□□□□ -1.71
RNU4-48P-201ENST00000365559 hCG_2014768A0A024R1R8 64 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 SHTN1A0MZ66 631 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 PHF2O75151 1096 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 GASTP01350 101 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 GSPT1P15170 499 aaKnown RBP4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 GNAT2P19087 354 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 C5AR1P21730 350 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 RABGGTBP53611 331 aa4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 PUM1Q14671 1186 aaKnown RBP eCLIP4.34□□□□□ -1.71
RNU4-48P-201ENST00000365559 RRP1BQ14684 758 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms