RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 TBC1D10BQ4KMP7 808 aaPredicted RBP5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 UBXN11Q5T124 520 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 FRMD5Q7Z6J6 570 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 MIER2Q8N344 545 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 SHCBP1Q8NEM2 672 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 RABGGTAQ92696 567 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 MEGF9Q9H1U4 602 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 SEC61A2Q9H9S3 476 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 CHPF2Q9P2E5 772 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 IPPQ9Y573 584 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 PCDHA13Q9Y5I0 950 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 ZNF536O15090 1300 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 UBE2QL1A1L167 161 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 WNT10BO00744 389 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 ADCY6O43306 1168 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 MARCH6O60337 910 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 CDC14BO60729 498 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 RFPL1O75677 317 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 INHBBP09529 407 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 SLC16A1P53985 500 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 RIN1Q13671 783 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 SURF1Q15526 300 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 ZFYVE27Q5T4F4 411 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 SPOCD1Q6ZMY3 1216 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 LIMS2Q7Z4I7 341 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 CATIPQ7Z7H3 387 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 TAX1BP1Q86VP1 789 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 CMTM4Q8IZR5 234 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 REPS2Q8NFH8 660 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 FBXO18Q8NFZ0 1043 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 HOXB13Q92826 284 aaPredicted RBP5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 PAWRQ96IZ0 340 aaKnown RBP5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 CAMKK2Q96RR4 588 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 KRTAP9-2Q9BYQ4 174 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 CSRNP2Q9H175 543 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 OAZ3Q9UMX2 235 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 SIK3Q9Y2K2 1263 aa5.63□□□□□ -1.51
RNU6-560P-201ENST00000364007 A0A0G2JLL6 359 aaPredicted RBP5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 MTSS1O43312 755 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 PHF2O75151 1096 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 STC2O76061 302 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 POU2F2P09086 479 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 HOXA5P20719 270 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 PDCP20941 246 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 WASP42768 502 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 SLC6A9P48067 706 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 MGAT2Q10469 447 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 DUSP8Q13202 625 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 MST1LQ2TV78 715 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 GAGE13Q4V321 117 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 RRP12Q5JTH9 1297 aaKnown RBP5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 SLFN13Q68D06 897 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 WDR75Q8IWA0 830 aaKnown RBP5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 OR5M3Q8NGP4 307 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 KAT5Q92993 513 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 RAB24Q969Q5 203 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 LRGUKQ96M69 825 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 ENKD1Q9H0I2 346 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 LDAHQ9H6V9 325 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 IL23AQ9NPF7 189 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 GPRC5DQ9NZD1 345 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 TRPS1Q9UHF7 1281 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 RCAN3Q9UKA8 241 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 PNMA8BQ9ULN7 279 aaPredicted RBP5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 ZMYM3Q14202 1370 aa5.62□□□□□ -1.51
RNU6-560P-201ENST00000364007 A0A1W2PRX2 142 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 NPEPPSL1A6NEC2 478 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 ITGA10O75578 1167 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 PLATP00750 562 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 ECHS1P30084 290 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 PER3P56645 1201 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 WNT3AP56704 352 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 DUSP2Q05923 314 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 FAM180AQ6UWF9 173 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 C14orf80Q86SX3 495 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 RHOT1Q8IXI2 618 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 PQLC1Q8N2U9 271 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 PRR18Q8N4B5 295 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 GIMAP8Q8ND71 665 aaPredicted RBP5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 MDM1Q8TC05 714 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 ZNF480Q8WV37 535 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 STON2Q8WXE9 905 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 TMEM176AQ96HP8 235 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 C20orf173Q96LM9 149 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 SSBP3Q9BWW4 388 aaPredicted RBP5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 PLA2G12BQ9BX93 195 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 GTPBP4Q9BZE4 634 aaKnown RBP5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 ANLNQ9NQW6 1124 aa5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 SAP30BPQ9UHR5 308 aaKnown RBP5.61□□□□□ -1.51
RNU6-560P-201ENST00000364007 KRTAP9-6A0A140TA67 174 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 PMS2P1A4D2B8 440 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 GPR42O15529 346 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 GYPEP15421 78 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 VCAM1P19320 739 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 LPOP22079 712 aaPredicted RBP5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 AKAP5P24588 427 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 CYP2C19P33261 490 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 SREBF1P36956 1147 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms