RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 UBXN8O00124 270 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 CYP2E1P05181 493 aaPredicted RBP10.25□□□□□ -0.77
CUX1-203ENST00000360264 DAB2P98082 770 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 NFX1Q12986 1120 aaKnown RBP10.25□□□□□ -0.77
CUX1-203ENST00000360264 USP17L5A8MUK1 530 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 C5orf58C9J3I9 102 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 ARL4DP49703 201 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 HPCAP84074 193 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 SFSWAPQ12872 951 aaKnown RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 MKRN3Q13064 507 aaKnown RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 EDC3Q96F86 508 aaKnown RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 TPI1P60174 286 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 MRPL28Q13084 256 aaKnown RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 FAM133BQ5BKY9 247 aaKnown RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 CENPPQ6IPU0 288 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 DTX3LQ8TDB6 740 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 POLE3Q9NRF9 147 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 GINM1Q9NU53 330 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 WDR35Q9P2L0 1181 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 RFX7Q2KHR2 1363 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 C3orf70A6NLC5 250 aaPredicted RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 CCDC22O60826 627 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 NCKAP1LP55160 1127 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 TAGAPQ8N103 731 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 ENAHQ8N8S7 591 aaPredicted RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 SPATA17Q96L03 361 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 RMDN2Q96LZ7 410 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 NLRP1Q9C000 1473 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 UBN2Q6ZU65 1347 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 TNPO2O14787 897 aaKnown RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 PDK1Q15118 436 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 PPHLN1Q8NEY8 458 aaKnown RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 PARVAQ9NVD7 372 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 CLCA2Q9UQC9 943 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 C16orf96A6NNT2 1141 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 SERPINI2O75830 405 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 PSD3Q9NYI0 1048 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 AURKCQ9UQB9 309 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 INPP5FQ9Y2H2 1132 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 AP1B1Q10567 949 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 PDCD6IPQ8WUM4 868 aaKnown RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 INTUQ9ULD6 942 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 USP11P51784 963 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 ZNF827Q17R98 1081 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 AIPL1Q9NZN9 384 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 PER1O15534 1290 aaPredicted RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 GUCY2CP25092 1073 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 PPP4R4Q6NUP7 873 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 TNIP3Q96KP6 325 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 ZSCAN32Q9NX65 697 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 HERC5Q9UII4 1024 aaKnown RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 PEX3P56589 373 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 STILQ15468 1287 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 NUDCD3Q8IVD9 361 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 DBNDD1Q9H9R9 158 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 NCAPD2Q15021 1401 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 HEG1Q9ULI3 1381 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 HIF1AQ16665 826 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 MMP10P09238 476 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 CRKP46108 304 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 PFKFB3Q16875 520 aaPredicted RBP10.24□□□□□ -0.77
CUX1-203ENST00000360264 SEPT3Q9UH03 358 aa10.24□□□□□ -0.77
CUX1-203ENST00000360264 ATICP31939 592 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 GPT2Q8TD30 523 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 RAPGEF5Q92565 580 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 TRAF3IP3Q9Y228 551 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 SAMD9Q5K651 1589 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 SPDYE5A6NIY4 337 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 SPDYE7PQ495Y7 208 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 RPAINQ86UA6 219 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 TRIM69Q86WT6 500 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 UNC5CLQ8IV45 518 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 KATNAL1Q9BW62 490 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 ECT2Q9H8V3 914 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 RCOR1Q9UKL0 485 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 DOLKQ9UPQ8 538 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 STK36Q9NRP7 1315 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 BCAR1P56945 870 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 OSTNP61366 133 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 DUOXA2Q1HG44 320 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 DPCR1Q3MIW9 517 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 PCDHA6Q9UN73 950 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 PCDHA8Q9Y5H6 950 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 CHRNA3P32297 505 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 ACCSLQ4AC99 568 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 SYTL2Q9HCH5 934 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 KRCC1Q9NPI7 259 aaPredicted RBP10.23□□□□□ -0.77
CUX1-203ENST00000360264 DNAJC12Q9UKB3 198 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 LRRC41Q15345 812 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 PHKG1Q16816 387 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 NSUN7Q8NE18 718 aaKnown RBP10.23□□□□□ -0.77
CUX1-203ENST00000360264 RASA4BC9J798 803 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 RASA4O43374 803 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 GH2P01242 217 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 ARHGAP18Q8N392 663 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 CATSPERBQ9H7T0 1116 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 NEK2P51955 445 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 INPP5AQ14642 412 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 RESP18Q5W5W9 173 aa10.23□□□□□ -0.77
CUX1-203ENST00000360264 PARK7Q99497 189 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms