RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 FMO5P49326 533 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 DNA2P51530 1060 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 KIF11P52732 1056 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 NCKAP1LP55160 1127 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 MARSP56192 900 aaKnown RBP5.53□□□□□ -1.52
ATXN3-202ENST00000359366 MYBPC2Q14324 1141 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 ARHGAP44Q17R89 818 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 KCTD19Q17RG1 926 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-202ENST00000359366 XKR3Q5GH77 459 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 C1orf220Q5T0J3 134 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 CCDC122Q5T0U0 273 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 HGSNATQ68CP4 663 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 KAT5Q92993 513 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 ZIC5Q96T25 663 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 CARD6Q9BX69 1037 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 PACSIN1Q9BY11 444 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 CXorf56Q9H5V9 222 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 ATP6V0A4Q9HBG4 840 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 SIX2Q9NPC8 291 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 ACP6Q9NPH0 428 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 PDLIM7Q9NR12 457 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 DMAC2Q9NW81 257 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 ANKFY1Q9P2R3 1169 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 SUFUQ9UMX1 484 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 PLAGL2Q9UPG8 496 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 MAFBQ9Y5Q3 323 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-202ENST00000359366 PLXNB2O15031 1838 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 A0A1W2PQJ5 194 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 CCDC189A1A4V9 331 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 IGF2BP3O00425 579 aaKnown RBP eCLIP5.53□□□□□ -1.52
ATXN3-202ENST00000359366 ADCY6O43306 1168 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 SRGAP2O75044 1071 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 GFPT2O94808 682 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 MAPTP10636 758 aaKnown RBP5.53□□□□□ -1.52
ATXN3-202ENST00000359366 GLRA2P23416 452 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 CNGA1P29973 690 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 ACOT2P49753 483 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 ZNF157P51786 506 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-202ENST00000359366 GTF2A2P52657 109 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 GTF2BQ00403 316 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 ELF2Q15723 593 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 ZC3H12AQ5D1E8 599 aaKnown RBP5.53□□□□□ -1.52
ATXN3-202ENST00000359366 KLHDC7AQ5VTJ3 777 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 SFMBT2Q5VUG0 894 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 ZNF787Q6DD87 383 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 IQCEQ6IPM2 695 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 METTL7BQ6UX53 244 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 STXBP4Q6ZWJ1 553 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 METTL13Q8N6R0 699 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 RETREG2Q8NC44 543 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 PRPF31Q8WWY3 499 aaKnown RBP5.53□□□□□ -1.52
ATXN3-202ENST00000359366 POMGNT1Q8WZA1 660 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 JAKMIP2Q96AA8 810 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 SPAG5Q96R06 1193 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 PSMB7Q99436 277 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 GPR20Q99678 358 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 FAM213AQ9BRX8 229 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 HAPLN2Q9GZV7 340 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 RNPEPQ9H4A4 650 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 HAUS4Q9H6D7 363 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 CEP72Q9P209 647 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 ADAMTS1Q9UHI8 967 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 PUF60Q9UHX1 559 aaKnown RBP5.53□□□□□ -1.52
ATXN3-202ENST00000359366 SALL4Q9UJQ4 1053 aa5.53□□□□□ -1.52
ATXN3-202ENST00000359366 A0A087X0T9 212 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 TMCO5BA8MYB1 307 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 ZBTB42B2RXF5 422 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 H0YHG0 523 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 SLC16A3O15427 465 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 CCP110O43303 1012 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 BUB1O43683 1085 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 KIF5CO60282 957 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 STAM2O75886 525 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 DGAT1O75907 488 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 ATG7O95352 703 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 MOCS3O95396 460 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 ITGBL1O95965 494 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 FAM228BP0C875 321 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 MATR3P43243 847 aaKnown RBP eCLIP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 CLCN3P51790 818 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 VAMP7P51809 220 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 SMTNP53814 917 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 SARNPP82979 210 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 MYL7Q01449 175 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 PTK2Q05397 1052 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 NCBP1Q09161 790 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 BFSP1Q12934 665 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 NEDD9Q14511 834 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 ZRSR2Q15696 482 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 SNRNP35Q16560 246 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 ERCC6LQ2NKX8 1250 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 FIGNQ5HY92 759 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 CELF3Q5SZQ8 465 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 PHLDB3Q6NSJ2 640 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 CCDC62Q6P9F0 684 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 GBP6Q6ZN66 633 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 ARMCX6Q7L4S7 300 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 GPR142Q7Z601 462 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 ZBTB33Q86T24 672 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 DPP9Q86TI2 863 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms