RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 XXYLT1Q8NBI6 393 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 POMGNT1Q8WZA1 660 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 KAT5Q92993 513 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 LENG1Q96BZ8 264 aaPredicted RBP13.73□□□□□ -0.21
GGPS1-202ENST00000358966 IFIH1Q9BYX4 1025 aaKnown RBP13.73□□□□□ -0.21
GGPS1-202ENST00000358966 HAUS4Q9H6D7 363 aa13.73□□□□□ -0.21
GGPS1-202ENST00000358966 A0A087X0T9 212 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 GOLGA6L9A6NEM1 432 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 IGF2BP3O00425 579 aaKnown RBP eCLIP13.72□□□□□ -0.21
GGPS1-202ENST00000358966 CSDE1O75534 798 aaKnown RBP13.72□□□□□ -0.21
GGPS1-202ENST00000358966 FAM228BP0C875 321 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 ZNF286BP0CG31 522 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 DLATP10515 647 aaKnown RBP13.72□□□□□ -0.21
GGPS1-202ENST00000358966 MYL7Q01449 175 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 SNRNP35Q16560 246 aaKnown RBP13.72□□□□□ -0.21
GGPS1-202ENST00000358966 MCPH1Q8NEM0 835 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 SLC7A3Q8WY07 619 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 UBXN6Q9BZV1 441 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 HAPLN2Q9GZV7 340 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 DHX33Q9H6R0 707 aaKnown RBP13.72□□□□□ -0.21
GGPS1-202ENST00000358966 L2HGDHQ9H9P8 463 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 ANKFY1Q9P2R3 1169 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 GFPT2O94808 682 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 IVLP07476 585 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 VAMP7P51809 220 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 PTK2Q05397 1052 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 GPR142Q7Z601 462 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 CDR2LQ86X02 465 aaPredicted RBP13.72□□□□□ -0.21
GGPS1-202ENST00000358966 AZI2Q9H6S1 392 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 CAPN6Q9Y6Q1 641 aa13.72□□□□□ -0.21
GGPS1-202ENST00000358966 LAMA2P24043 3122 aaKnown RBP13.72□□□□□ -0.21
GGPS1-202ENST00000358966 ZBTB42B2RXF5 422 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 ADCY6O43306 1168 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 ITGBL1O95965 494 aaPredicted RBP13.71□□□□□ -0.21
GGPS1-202ENST00000358966 SRGAP2CP0DJJ0 459 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 ACOT2P49753 483 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 MNAT1P51948 309 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 CORO7P57737 925 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 KLHL30Q0D2K2 578 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 MKRN4PQ13434 485 aaPredicted RBP13.71□□□□□ -0.21
GGPS1-202ENST00000358966 PTPROQ16827 1216 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 PRAMEF19Q5SWL8 479 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 SCARA3Q6AZY7 606 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 PHLDB3Q6NSJ2 640 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 LEKR1Q6ZMV7 388 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 FAM213AQ9BRX8 229 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 ACP6Q9NPH0 428 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 ARHGAP28Q9P2N2 729 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 ADAM21Q9UKJ8 722 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 PCDHA13Q9Y5I0 950 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 IVNS1ABPQ9Y6Y0 642 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 BUB1O43683 1085 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 SRGAP2O75044 1071 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 SEC31AO94979 1220 aaKnown RBP13.71□□□□□ -0.21
GGPS1-202ENST00000358966 IPO7O95373 1038 aaKnown RBP13.71□□□□□ -0.21
GGPS1-202ENST00000358966 TGFB3P10600 412 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 CAPSQ13938 189 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 SPA17Q15506 151 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 ASTE1Q2TB18 679 aaPredicted RBP13.71□□□□□ -0.21
GGPS1-202ENST00000358966 ZNF792Q3KQV3 632 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 ZNF571Q7Z3V5 609 aaPredicted RBP13.71□□□□□ -0.21
GGPS1-202ENST00000358966 DPP9Q86TI2 863 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 SLC9A9Q8IVB4 645 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 EXOC4Q96A65 974 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 IFT74Q96LB3 600 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 MKNK1Q9BUB5 465 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 TARS2Q9BW92 718 aaKnown RBP13.71□□□□□ -0.21
GGPS1-202ENST00000358966 INTS2Q9H0H0 1204 aaKnown RBP13.71□□□□□ -0.21
GGPS1-202ENST00000358966 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
GGPS1-202ENST00000358966 KRT13P13646 458 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 ZNF157P51786 506 aaPredicted RBP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 CLCN3P51790 818 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 TARBP2Q15633 366 aaKnown RBP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 ASIC2Q16515 512 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 NFIL3Q16649 462 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 SLC9C1Q4G0N8 1177 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 NAIF1Q69YI7 327 aaPredicted RBP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 TAPT1Q6NXT6 567 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 IRF2BP2Q7Z5L9 587 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 ARHGEF19Q8IW93 802 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 CCDC170Q8IYT3 715 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 ZNF513Q8N8E2 541 aaPredicted RBP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 PRPF31Q8WWY3 499 aaKnown RBP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 PSMB7Q99436 277 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 ST6GALNAC4Q9H4F1 302 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 PUF60Q9UHX1 559 aaKnown RBP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 DKC1O60832 514 aaKnown RBP eCLIP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 MOCS3O95396 460 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 SNAI1O95863 264 aaPredicted RBP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 SMC1AQ14683 1233 aaKnown RBP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 OTUD6BQ8N6M0 293 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 NPLOC4Q8TAT6 608 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 ITFG2Q969R8 447 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 ZIC5Q96T25 663 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 NTPCRQ9BSD7 190 aaKnown RBP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 TIPINQ9BVW5 301 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 CALCAP01258 141 aa13.7□□□□□ -0.22
GGPS1-202ENST00000358966 ATP1A1P05023 1023 aaKnown RBP13.7□□□□□ -0.22
GGPS1-202ENST00000358966 VAV2P52735 878 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms