RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 PPM1NQ8N819 430 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 ZNF564Q8TBZ8 553 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DEPDC1BQ8WUY9 529 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 WDR60Q8WVS4 1066 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 CTNNAL1Q9UBT7 734 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 NEDD4P46934 1319 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 GOLGA8TH3BQL2 631 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 LRRN2O75325 713 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 GOLGA8HP0CJ92 632 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 ATP6V1C1P21283 382 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 GSCP56915 257 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 KCNJ2P63252 427 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 ZNF844Q08AG5 666 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 TRIM67Q6ZTA4 783 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 MTRQ99707 1265 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 ZWILCHQ9H900 591 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 ARHGAP26Q9UNA1 814 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 ZNF233A6NK53 670 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 TBC1D4O60343 1298 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 MXI1P50539 228 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 EZH2Q15910 746 aaKnown RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 CATSPER3Q86XQ3 398 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 SIX6OS1Q8N1H7 587 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 HERC5Q9UII4 1024 aaKnown RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 LDHBP07195 334 aaKnown RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 VCAM1P19320 739 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 PSMC2P35998 433 aaKnown RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 RPS6P62753 249 aaKnown RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 H0Y626 953 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 CHN2P52757 468 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 SFR1Q86XK3 245 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 GLYCTKQ8IVS8 523 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 C4orf33Q8N1A6 199 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 APOL6Q9BWW8 343 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 HEMGNQ9BXL5 484 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 PVALEFA0A1B0GWK0 134 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 PRPSAP1Q14558 356 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 AOC3Q16853 763 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 ADSSL1Q8N142 457 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 FAF2Q96CS3 445 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 GOLGA8SH3BPF8 625 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 GOLGA8MH3BSY2 632 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 TNNI1P19237 187 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 S100A5P33763 92 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 NLRP11P59045 1033 aaKnown RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 HP1BP3Q5SSJ5 553 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 ELOA2Q8IYF1 753 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 CYP39A1Q9NYL5 469 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 GAS7O60861 476 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 WFS1O76024 890 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 PDIA2Q13087 525 aaKnown RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 MORF4L2Q15014 288 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 SYCP2LQ5T4T6 812 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 LRRC8EQ6NSJ5 796 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 TSHZ1Q6ZSZ6 1077 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 TBC1D10CQ8IV04 446 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 PNMA1Q8ND90 353 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 RASGRP4Q8TDF6 673 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 C1orf54Q8WWF1 131 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 DOPEY1Q5JWR5 2465 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 SEC24DO94855 1032 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 TNFRSF8P28908 595 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 ATP1A4Q13733 1029 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 CDR2LQ86X02 465 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 TSEN2Q8NCE0 465 aaKnown RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 MCUQ8NE86 351 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 CHP1Q99653 195 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 THTPAQ9BU02 230 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 CBX6O95503 412 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 YY1P25490 414 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 STX3Q13277 289 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 PSTPIP2Q9H939 334 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 SYF2O95926 243 aaKnown RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 SRGAP2BP0DMP2 458 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 EPHB2P29323 1055 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 FNTAP49354 379 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 PEX5P50542 639 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 IGBP1P78318 339 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 PRPF39Q86UA1 669 aaKnown RBP6.43□□□□□ -1.38
VPS13B-203ENST00000358544 ZNF786Q8N393 782 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 ARL10Q8N8L6 244 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 PBXIP1Q96AQ6 731 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 CNBD2Q96M20 576 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 SOX5P35711 763 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 MMP14P50281 582 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 HEATR4Q86WZ0 1026 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 KCTD6Q8NC69 237 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 ABHD8Q96I13 439 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 GJB4Q9NTQ9 266 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 KCNG1Q9UIX4 513 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 UHRF1BP1LA0JNW5 1464 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 FAM58BPP0C7Q3 252 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 CD302Q8IX05 232 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 ACAP3Q96P50 834 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 MANSC1Q9H8J5 431 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 EMILIN3Q9NT22 766 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 HAO1Q9UJM8 370 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 MROH5Q6ZUA9 1318 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 WDR62O43379 1518 aa6.43□□□□□ -1.38
VPS13B-203ENST00000358544 POTEB3A0JP26 581 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms