RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 MIF4GDA9UHW6 222 aaKnown RBP7.04□□□□□ -1.28
CSDE1-203ENST00000358528 CALRP27797 417 aaKnown RBP7.04□□□□□ -1.28
CSDE1-203ENST00000358528 GBP1P32455 592 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 DLG4P78352 724 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 PREPLQ4J6C6 727 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-203ENST00000358528 PRR5LQ6MZQ0 368 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 CDC42EP5Q6NZY7 148 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 RFX8Q6ZV50 586 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 POMGNT1Q8WZA1 660 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 CCDC17Q96LX7 622 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 FNBP1Q96RU3 617 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 PI4K2AQ9BTU6 479 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 TEKT3Q9BXF9 490 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 SAYSD1Q9NPB0 183 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 AGPAT3Q9NRZ7 376 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 PCDHAC2Q9Y5I4 1007 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 NDUFB10O96000 172 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 COILP38432 576 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-203ENST00000358528 MXRA7P84157 204 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 IL9RQ01113 521 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 DNAJC3Q13217 504 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 AP3B2Q13367 1082 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 COBLL1Q53SF7 1204 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 UBAP2Q5T6F2 1119 aaKnown RBP7.04□□□□□ -1.28
CSDE1-203ENST00000358528 PADI6Q6TGC4 694 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 PRUNE1Q86TP1 453 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 ARHGEF19Q8IW93 802 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 LRRC8CQ8TDW0 803 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 CPA5Q8WXQ8 436 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 FAM20AQ96MK3 541 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 NT5C1BQ96P26 610 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 CSRNP1Q96S65 589 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 CBWD1Q9BRT8 395 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 TDRD3Q9H7E2 651 aaKnown RBP7.04□□□□□ -1.28
CSDE1-203ENST00000358528 TRAF3IP3Q9Y228 551 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 IKBKGQ9Y6K9 419 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 NUP98P52948 1817 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 SPATA31A1Q5TZJ5 1347 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 TESPA1A2RU30 521 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 TMEM150BA6NC51 233 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 GOLGA8RI6L899 631 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 PPEF1O14829 653 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 KIAA0391O15091 583 aaKnown RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 RASSF9O75901 435 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 ALAS1P13196 640 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 NQO1P15559 274 aaKnown RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 HSPA6P17066 643 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 CD58P19256 250 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 ALDH5A1P51649 535 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 ITGA8P53708 1063 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 MFAP3P55082 362 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 MUM1Q2TAK8 710 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 SYCP2LQ5T4T6 812 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 ARHGEF18Q6ZSZ5 1173 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 EPM2AIP1Q7L775 607 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 AGAP11Q8TF27 550 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 ATP8B4Q8TF62 1192 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 DHX38Q92620 1227 aaKnown RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 HES6Q96HZ4 224 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 ZSWIM1Q9BR11 485 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 TCHPQ9BT92 498 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 KIFC3Q9BVG8 833 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 KDM4CQ9H3R0 1056 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 MYH3P11055 1940 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 ANKRD63C9JTQ0 380 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 H0YGN5 161 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 SLC16A3O15427 465 aaKnown RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 RIPK2O43353 540 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 MYCNP04198 464 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 RARAP10276 462 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 SMARCA1P28370 1054 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 SHMT1P34896 483 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 CRKP46108 304 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 NSFP46459 744 aaKnown RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 CLUL1Q15846 466 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 PHLDB3Q6NSJ2 640 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 MIGA2Q7L4E1 593 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 SLC47A2Q86VL8 602 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 SLC13A5Q86YT5 568 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 PRELID2Q8N945 189 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 MCUR1Q96AQ8 359 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 ERP27Q96DN0 273 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 C11orf70Q9BRQ4 267 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 MTFR1LQ9H019 292 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 COG5Q9UP83 839 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 SCAF8Q9UPN6 1271 aaKnown RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 DIS3Q9Y2L1 958 aaKnown RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 NFS1Q9Y697 457 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 TRPM3Q9HCF6 1732 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 ATP2A1O14983 1001 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 TGFB1I1O43294 461 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 PIAS1O75925 651 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 GH1P01241 217 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 SPATA31C1P0DKV0 1188 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 TARSP26639 723 aaKnown RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 ECHS1P30084 290 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 PRELPP51888 382 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 WDR44Q5JSH3 913 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 DUPD1Q68J44 220 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 DCUN1D2Q6PH85 259 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms