RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 RPS6KA4O75676 772 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 QARSP47897 775 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 TOB1P50616 345 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 LONRF1Q17RB8 773 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 FSCBQ5H9T9 825 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 CDKAL1Q5VV42 579 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 C9orf72Q96LT7 481 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 GOLPH3Q9H4A6 298 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 APEX2Q9UBZ4 518 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 LCMT1Q9UIC8 334 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 CAPN6Q9Y6Q1 641 aa16.61■□□□□ 0.25
TRAPPC11-202ENST00000357207 ZNF18P17022 549 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 HSD17B3P37058 310 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 SATB1Q01826 763 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 TMED1Q13445 227 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 MTMR1Q13613 665 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 BZW1Q7L1Q6 419 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 RGL1Q9NZL6 768 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 IP6K2Q9UHH9 426 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 CPS1P31327 1500 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 PITPNM2Q9BZ72 1349 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 PFDN6O15212 129 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 CYP26A1O43174 497 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 MGEA5O60502 916 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 AKR1B1P15121 316 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 AGGF1Q8N302 714 aaeCLIP16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 CCDC138Q96M89 665 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 HAUS8Q9BT25 410 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 KRT7P08729 469 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 KITP10721 976 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 FMO5P49326 533 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 HAUS6Q7Z4H7 955 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 RAB44Q7Z6P3 723 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 NUDCD3Q8IVD9 361 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 UVRAGQ9P2Y5 699 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 NARFQ9UHQ1 456 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 RAB21Q9UL25 225 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 STRIP2Q9ULQ0 834 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 SMG5Q9UPR3 1016 aaKnown RBP16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 HEY1Q9Y5J3 304 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 DLC1Q96QB1 1528 aa16.6■□□□□ 0.25
TRAPPC11-202ENST00000357207 MYBL1P10243 752 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 FIGNQ5HY92 759 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 RSBN1LQ6PCB5 846 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 TRIM72Q6ZMU5 477 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 SYDE1Q6ZW31 735 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 EXOC8Q8IYI6 725 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 THNSL1Q8IYQ7 743 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 LXNQ9BS40 222 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 APOL6Q9BWW8 343 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 CLDN3O15551 220 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 HNRNPCL1O60812 293 aaKnown RBP16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 APOEP02649 317 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 SRGAP2CP0DJJ0 459 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 CCND1P24385 295 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 ARSEP51690 589 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 NOP14P78316 857 aaKnown RBP16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 XAB2Q9HCS7 855 aaKnown RBP16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 ANLNQ9NQW6 1124 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 SUFUQ9UMX1 484 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 STXBP3O00186 592 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 DYNC1I2Q13409 638 aaKnown RBP16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 SLC29A2Q14542 456 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 RBM15Q96T37 977 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 ROPN1BQ9BZX4 212 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 ROPN1Q9HAT0 212 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 LRRC4Q9HBW1 653 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 SUCLA2Q9P2R7 463 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 PCSK1NQ9UHG2 260 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 A0A087X0T9 212 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 CCDC22O60826 627 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 FAM228BP0C875 321 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 GNA15P30679 374 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 THOC5Q13769 683 aaKnown RBP16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 ARHGAP18Q8N392 663 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 RNF169Q8NCN4 708 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 CEP70Q8NHQ1 597 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 CXorf38Q8TB03 319 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 RPF1Q9H9Y2 349 aaKnown RBP16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 ALG6Q9Y672 507 aa16.59■□□□□ 0.25
TRAPPC11-202ENST00000357207 TMEM120BA0PK00 339 aa16.58■□□□□ 0.25
TRAPPC11-202ENST00000357207 CREB3O43889 395 aa16.58■□□□□ 0.25
TRAPPC11-202ENST00000357207 DNAJC8O75937 253 aaPredicted RBP16.58■□□□□ 0.25
TRAPPC11-202ENST00000357207 TMEM253P0C7T8 217 aa16.58■□□□□ 0.25
TRAPPC11-202ENST00000357207 KRT10P13645 584 aa16.58■□□□□ 0.25
TRAPPC11-202ENST00000357207 EEF1B2P24534 225 aaKnown RBP16.58■□□□□ 0.25
TRAPPC11-202ENST00000357207 TBXAS1P24557 533 aaPredicted RBP16.58■□□□□ 0.25
TRAPPC11-202ENST00000357207 MIGA2Q7L4E1 593 aa16.58■□□□□ 0.25
TRAPPC11-202ENST00000357207 STAMBPL1Q96FJ0 436 aa16.58■□□□□ 0.25
TRAPPC11-202ENST00000357207 SNX25Q9H3E2 840 aa16.58■□□□□ 0.25
TRAPPC11-202ENST00000357207 AKT3Q9Y243 479 aa16.58■□□□□ 0.25
TRAPPC11-202ENST00000357207 PGM1P36871 562 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 RGS9BPQ6ZS82 235 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 CASKIN2Q8WXE0 1202 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 RMDN3Q96TC7 470 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 REEP2Q9BRK0 252 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 ASNSD1Q9NWL6 643 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 SLC9A2Q9UBY0 812 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 APBA3O96018 575 aa16.58■□□□□ 0.24
TRAPPC11-202ENST00000357207 ASNSP08243 561 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms