RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 DUX4Q9UBX2 424 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 INTUQ9ULD6 942 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 HEY1Q9Y5J3 304 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 CPSF1Q10570 1443 aaKnown RBP6.85□□□□□ -1.31
UPF2-201ENST00000356352 RNF103-CHMP3A0A140T963 221 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 CCDC78A2IDD5 438 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 CFAP73A6NFT4 308 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 PI4K2BG5E9Z4 385 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 DNAJC6O75061 913 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 HSD17B4P51659 736 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 BCAR1P56945 870 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 MAP3K7CLP57077 242 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 INPP5AQ14642 412 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 PROSER3Q2NL68 480 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 RARS2Q5T160 578 aaKnown RBP6.85□□□□□ -1.31
UPF2-201ENST00000356352 TBC1D1Q86TI0 1168 aaPredicted RBP6.85□□□□□ -1.31
UPF2-201ENST00000356352 RAPGEF5Q92565 580 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 NDFIP2Q9NV92 336 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 LSM7Q9UK45 103 aaKnown RBP6.85□□□□□ -1.31
UPF2-201ENST00000356352 CDHR2Q9BYE9 1310 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 SUPT3HO75486 399 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 ALDH1A1P00352 501 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 CLCN6P51797 869 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 DMTNQ08495 405 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 ANO4Q32M45 955 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 RGS9BPQ6ZS82 235 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 ZC3H18Q86VM9 953 aaKnown RBP6.85□□□□□ -1.31
UPF2-201ENST00000356352 ICA1LQ8NDH6 482 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 SH3RF3Q8TEJ3 882 aaPredicted RBP6.85□□□□□ -1.31
UPF2-201ENST00000356352 KRT35Q92764 455 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 DYDC2Q96IM9 177 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 CYTH2Q99418 400 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 HINFPQ9BQA5 517 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 RNF146Q9NTX7 359 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 TJP2Q9UDY2 1190 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 MYO5CQ9NQX4 1742 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 ARAP3Q8WWN8 1544 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 ZNF335Q9H4Z2 1342 aaPredicted RBP6.85□□□□□ -1.31
UPF2-201ENST00000356352 SHROOM2Q13796 1616 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 KRT14P02533 472 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 APOA4P06727 396 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 HLA-DPA1P20036 260 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 PSMA3P25788 255 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 USP11P51784 963 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 PPP2R2AP63151 447 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 SLC7A5Q01650 507 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 SYTL3Q4VX76 610 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 RHPN2Q8IUC4 686 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 TAGAPQ8N103 731 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 PGBD4Q96DM1 585 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 STRBPQ96SI9 672 aaKnown RBP6.85□□□□□ -1.31
UPF2-201ENST00000356352 KATNAL1Q9BW62 490 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 NDEL1Q9GZM8 345 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 TUFT1Q9NNX1 390 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 SLC9A2Q9UBY0 812 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 SNX24Q9Y343 169 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 COPG1Q9Y678 874 aaKnown RBP6.85□□□□□ -1.31
UPF2-201ENST00000356352 MROH7-TTC4A0A0A0MT08 1334 aa6.85□□□□□ -1.31
UPF2-201ENST00000356352 LRRC53A6NM62 1247 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 A8MXQ7 604 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 H7C1W4 665 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 SLC16A4O15374 487 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 ECE2O60344 883 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 PLEKHA8P1O95397 391 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 CPB1P15086 417 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 KCNA2P16389 499 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 MAP4P27816 1152 aaKnown RBP6.84□□□□□ -1.31
UPF2-201ENST00000356352 KCNH2Q12809 1159 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 ACCSLQ4AC99 568 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 FRMD5Q7Z6J6 570 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 NUDCD3Q8IVD9 361 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 MFN1Q8IWA4 741 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 CCNYL1Q8N7R7 359 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 RBM46Q8TBY0 533 aaKnown RBP6.84□□□□□ -1.31
UPF2-201ENST00000356352 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.84□□□□□ -1.31
UPF2-201ENST00000356352 SRPK1Q96SB4 655 aaKnown RBP6.84□□□□□ -1.31
UPF2-201ENST00000356352 C11orf70Q9BRQ4 267 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 WWP1Q9H0M0 922 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 PLEKHA5Q9HAU0 1116 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 RAVER2Q9HCJ3 691 aaKnown RBP6.84□□□□□ -1.31
UPF2-201ENST00000356352 SARS2Q9NP81 518 aaKnown RBP6.84□□□□□ -1.31
UPF2-201ENST00000356352 POTEB3A0JP26 581 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 DTNBO60941 627 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 GCLMP48507 274 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 KCNQ4P56696 695 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 POU5F1BQ06416 359 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 TMEM259Q4ZIN3 620 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 POTEBQ6S5H4 581 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 TEX2Q8IWB9 1127 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 PIGOQ8TEQ8 1089 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 ABHD8Q96I13 439 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 SPATA33Q96N06 139 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 WRNIP1Q96S55 665 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 ADA2Q9NZK5 511 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 WDR35Q9P2L0 1181 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 GDAQ9Y2T3 454 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 ZHX2Q9Y6X8 837 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 UBN2Q6ZU65 1347 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 APOA1P02647 267 aa6.84□□□□□ -1.31
UPF2-201ENST00000356352 HIST1H2AGP0C0S8 130 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms